Detailed information NTG0092060

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU78_RS11945
• Genome accession: NZ_AP025490
• Coordinates: 2761400..2762437 (-)
• Length: 345 a.a.
• NCBI ID: WP_137373359.1
• Uniprot ID: -
• Organism: Vibrio gallaecicus strain CECT 7244
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2756400..2767437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU78_RS11930	csrA	2756947..2757144 (-)	198	WP_009847619.1	carbon storage regulator CsrA	-
OCU78_RS11935	-	2757238..2758419 (-)	1182	WP_137373360.1	aspartate kinase	-
OCU78_RS11940	alaS	2758640..2761222 (-)	2583	WP_065102962.1	alanine--tRNA ligase	-
OCU78_RS11945	recA	2761400..2762437 (-)	1038	WP_137373359.1	recombinase RecA	Machinery gene
OCU78_RS11950	pncC	2762617..2763108 (-)	492	WP_137373358.1	nicotinamide-nucleotide amidase	-
OCU78_RS11955	mutS	2763243..2765804 (+)	2562	WP_137373357.1	DNA mismatch repair protein MutS	-
OCU78_RS11960	rpoS	2765897..2766880 (-)	984	WP_137373356.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37135.52 Da
• Isoelectric Point: 4.7975

>NTDB_id=92060 OCU78_RS11945 WP_137373359.1 2761400..2762437(-) (recA) [Vibrio gallaecicus strain CECT 7244]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDVALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEIVGNE
TRIKVVKNKIAAPFKQAETQILYGQGFNREGELIDLGVKNKLVDKAGAWYSYNGDKIGQGKSNSCKYLRENPTIALEIDT
KLRELLLTPAVLEEAGSEEEPQEEL

Nucleotide

• Length: 1038 bp

>NTDB_id=92060 OCU78_RS11945 WP_137373359.1 2761400..2762437(-) (recA) [Vibrio gallaecicus strain CECT 7244]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCTCTTGGACAAATTGAAAAGCAATTTGGTAAAGGTTCGATCATGCG
TCTAGGTGATAACCGCACAATGGATGTAGAAACAATCTCTACTGGTTCACTATCTCTTGATGTTGCTCTAGGTGCTGGTG
GTTTACCTATGGGTCGTATTGTTGAAGTTTACGGACCTGAATCATCAGGTAAAACAACGTTGACTCTTGAGCTTATCGCC
GCTGCACAGAAAGTCGGTAAGACATGTGCATTCGTTGATGCTGAGCACGCTCTAGACCCAATCTACGCTCAAAAACTTGG
TGTAGATATTGATGCTTTACTTGTATCTCAACCTGATACTGGCGAACAAGCTCTAGAAATCTGTGATGCACTTGCTCGTT
CTGGCGCTATTGACGTTTTAGTTATTGACTCAGTTGCTGCATTGACTCCAAAAGCTGAAATTGAAGGCGAAATGGGTGAT
AGCCACATGGGTCTTCAAGCTCGTATGCTGTCTCAAGCAATGCGTAAGCTAACAGGTAACCTAAAGCAATCTAACTGTAT
GGCTATTTTCATTAACCAAATCCGTATGAAAATTGGTGTAATGTTTGGTAATCCAGAAACCACAACGGGTGGTAACGCAC
TTAAATTCTACGCATCTGTTCGTCTTGATATTCGCCGCACAGGCTCTATCAAAGAAGGCGATGAAATTGTTGGTAATGAA
ACTCGTATCAAAGTCGTTAAAAACAAGATTGCAGCGCCATTTAAGCAAGCTGAAACTCAAATTTTATATGGTCAAGGCTT
TAACCGTGAAGGTGAGTTGATTGACTTAGGTGTTAAAAACAAGCTTGTAGATAAAGCGGGTGCTTGGTACAGCTACAATG
GCGATAAGATTGGTCAAGGTAAGTCTAACTCTTGTAAGTACCTTCGTGAAAACCCAACAATTGCTTTAGAAATTGATACT
AAATTACGTGAGCTACTGCTTACACCTGCTGTTCTTGAAGAAGCAGGTTCTGAAGAAGAGCCTCAAGAAGAGCTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.362	95.362	0.852
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.362	95.362	0.852
recA	Acinetobacter baylyi ADP1	72.965	99.71	0.728
recA	Acinetobacter baumannii D1279779	72.886	99.42	0.725
recA	Pseudomonas stutzeri DSM 10701	74.018	95.942	0.71
recA	Neisseria gonorrhoeae MS11	70.245	94.493	0.664
recA	Neisseria gonorrhoeae MS11	70.245	94.493	0.664
recA	Neisseria gonorrhoeae strain FA1090	70.245	94.493	0.664
recA	Glaesserella parasuis strain SC1401	70.062	93.913	0.658
recA	Ralstonia pseudosolanacearum GMI1000	71.429	91.304	0.652
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.58	100	0.606
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	93.043	0.583
recA	Helicobacter pylori 26695	61.538	94.203	0.58
recA	Helicobacter pylori strain NCTC11637	61.231	94.203	0.577
recA	Streptococcus mutans UA159	58.187	99.13	0.577
recA	Streptococcus pneumoniae R6	60.991	93.623	0.571
recA	Streptococcus pneumoniae TIGR4	60.991	93.623	0.571
recA	Streptococcus pneumoniae Rx1	60.991	93.623	0.571
recA	Streptococcus pneumoniae D39	60.991	93.623	0.571
recA	Streptococcus mitis NCTC 12261	60.681	93.623	0.568
recA	Streptococcus mitis SK321	60.372	93.623	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.748	93.043	0.565
recA	Streptococcus pyogenes NZ131	60	94.203	0.565
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.912	95.942	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	93.043	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.133	93.623	0.554