Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | R4706_RS06935 | Genome accession | NZ_CP137111 |
| Coordinates | 1370574..1371740 (+) | Length | 388 a.a. |
| NCBI ID | WP_001085463.1 | Uniprot ID | A0A062WS62 |
| Organism | Streptococcus pneumoniae strain 17023 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 1357192..1376421 | 1370574..1371740 | within | 0 |
Gene organization within MGE regions
Location: 1357192..1376421
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R4706_RS06865 | - | 1357192..1359300 (-) | 2109 | WP_000701298.1 | peptidase domain-containing ABC transporter | - |
| R4706_RS06870 | - | 1359297..1360226 (-) | 930 | WP_000912954.1 | M50 family metallopeptidase | - |
| R4706_RS06875 | - | 1360207..1360911 (-) | 705 | WP_001033170.1 | flavodoxin family protein | - |
| R4706_RS06880 | - | 1361261..1362271 (-) | 1011 | WP_001812207.1 | lanthionine synthetase LanC family protein | - |
| R4706_RS06885 | lanM | 1362313..1364250 (-) | 1938 | WP_001837267.1 | type 2 lanthipeptide synthetase LanM | - |
| R4706_RS06890 | pneA2 | 1364367..1364555 (-) | 189 | WP_050198750.1 | two-peptide bacteriocin subunit PneA2 | - |
| R4706_RS06895 | pneA1 | 1364562..1364786 (-) | 225 | WP_000181087.1 | two-peptide bacteriocin subunit PneA1 | - |
| R4706_RS06900 | - | 1364889..1365059 (-) | 171 | WP_001227862.1 | PhrA family quorum-sensing system peptide | - |
| R4706_RS06905 | - | 1365251..1366114 (+) | 864 | WP_001093620.1 | helix-turn-helix domain-containing protein | - |
| R4706_RS06910 | comM | 1366497..1367117 (+) | 621 | WP_000839909.1 | hypothetical protein | Regulator |
| R4706_RS06915 | tsaE | 1367203..1367646 (+) | 444 | WP_000288230.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| R4706_RS06920 | - | 1367636..1368154 (+) | 519 | WP_000455536.1 | GNAT family N-acetyltransferase | - |
| R4706_RS06925 | brpA | 1368162..1369178 (+) | 1017 | WP_000239278.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| R4706_RS06930 | cinA | 1369263..1370519 (+) | 1257 | WP_000642707.1 | competence/damage-inducible protein A | Machinery gene |
| R4706_RS06935 | recA | 1370574..1371740 (+) | 1167 | WP_001085463.1 | recombinase RecA | Machinery gene |
| R4706_RS06940 | - | 1372047..1373417 (+) | 1371 | WP_001036282.1 | MATE family efflux transporter | - |
| R4706_RS06945 | lytA | 1373793..1374749 (+) | 957 | WP_000405236.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| R4706_RS06950 | - | 1375108..1375269 (+) | 162 | WP_000289348.1 | helix-turn-helix domain-containing protein | - |
| R4706_RS06955 | - | 1375256..1375867 (+) | 612 | WP_224757307.1 | ImmA/IrrE family metallo-endopeptidase | - |
| R4706_RS06960 | - | 1375996..1376421 (+) | 426 | WP_000204067.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 388 a.a. Molecular weight: 41953.77 Da Isoelectric Point: 4.8403
>NTDB_id=895968 R4706_RS06935 WP_001085463.1 1370574..1371740(+) (recA) [Streptococcus pneumoniae strain 17023]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVTLDLGDELEIEIEE
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVTLDLGDELEIEIEE
Nucleotide
Download Length: 1167 bp
>NTDB_id=895968 R4706_RS06935 WP_001085463.1 1370574..1371740(+) (recA) [Streptococcus pneumoniae strain 17023]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGACCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTACGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGACCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTACGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.