Detailed information NTG0066401

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: JCM16456_RS02480
• Genome accession: NZ_AP014635
• Coordinates: 536355..537404 (+)
• Length: 349 a.a.
• NCBI ID: WP_068712071.1
• Uniprot ID: -
• Organism: Vibrio tritonius strain AM2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 531355..542404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JCM16456_RS02465	rpoS	531984..532985 (+)	1002	WP_068712068.1	RNA polymerase sigma factor RpoS	Regulator
JCM16456_RS02470	mutS	533064..535628 (-)	2565	WP_068712069.1	DNA mismatch repair protein MutS	-
JCM16456_RS02475	-	535713..536198 (+)	486	WP_068715848.1	CinA family protein	-
JCM16456_RS02480	recA	536355..537404 (+)	1050	WP_068712071.1	recombinase RecA	Machinery gene
JCM16456_RS02485	recX	537475..537942 (+)	468	WP_068715850.1	recombination regulator RecX	-
JCM16456_RS02490	alaS	538099..540681 (+)	2583	WP_068712073.1	alanine--tRNA ligase	-
JCM16456_RS02495	-	540877..542064 (+)	1188	WP_068712074.1	aspartate kinase	-
JCM16456_RS02500	csrA	542156..542353 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37690.16 Da
• Isoelectric Point: 5.0719

>NTDB_id=66401 JCM16456_RS02480 WP_068712071.1 536355..537404(+) (recA) [Vibrio tritonius strain AM2]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPIYARKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKASNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANACKYLKENTHIAHELDT
KLRDMLLSPVSEADVEEVDAKAAPEQEEL

Nucleotide

• Length: 1050 bp

>NTDB_id=66401 JCM16456_RS02480 WP_068712071.1 536355..537404(+) (recA) [Vibrio tritonius strain AM2]
ATGGACGAAAATAAACAGAAGGCTCTCGCAGCAGCCCTAGGTCAAATTGAGAAACAATTCGGTAAAGGTTCCATTATGCG
CCTTGGTGACAACCGCACAATGGATGTAGAAACGATTTCTACAGGTTCTCTCTCTCTAGACATCGCGTTAGGTGCTGGTG
GTTTACCAATGGGCCGTATCGTTGAAATCTATGGTCCAGAATCGTCAGGTAAAACAACCCTTACTCTTGAACTTATCGCA
GCAGCGCAACGTGAAGGTAAAACCTGTGCGTTTATCGATGCAGAGCACGCGCTTGACCCTATCTACGCTCGTAAATTGGG
TGTAAATATCGATGAACTTTTGGTTTCTCAACCAGATACAGGTGAACAAGCACTTGAAATCTGTGATGCTTTGGCTCGTT
CTGGCGCGGTTGATGTTATGGTTGTCGACTCGGTTGCGGCATTGACTCCTAAAGCTGAAATTGAAGGCGAAATGGGTGAT
AGCCACATGGGTCTGCAAGCTCGTATGCTTTCTCAAGCGATGCGTAAGCTAACTGGTAACCTAAAAGCCTCTAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACTACAGGTGGTAACGCAC
TTAAATTCTACGCTTCTGTTCGTCTTGATATTCGTCGTACTGGCGCAATCAAAGAAGGTGATGAAGTTGTGGGTAACGAA
ACCCGCATCAAAGTAGTGAAAAACAAAATTGCTGCACCATTTAAAGAAGCAAACACGCAAATTATGTATGGTCAAGGCTT
TAACCGTGAAGGTGAGCTAATCGACCTAGGTGTTAAACACAAATTGGTTGAAAAAGCAGGTGCATGGTACAGCTACAATG
GCGACAAAATTGGCCAAGGTAAAGCAAATGCGTGTAAGTATCTAAAAGAGAACACACATATTGCGCATGAGTTAGATACT
AAACTACGCGATATGCTGCTTAGCCCTGTGTCAGAAGCTGATGTAGAAGAAGTGGATGCAAAAGCAGCCCCTGAGCAAGA
AGAGCTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.085	100	0.911
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.085	100	0.911
recA	Pseudomonas stutzeri DSM 10701	72.779	100	0.728
recA	Acinetobacter baylyi ADP1	70.725	98.854	0.699
recA	Acinetobacter baumannii D1279779	74.39	93.983	0.699
recA	Glaesserella parasuis strain SC1401	70.029	99.427	0.696
recA	Neisseria gonorrhoeae MS11	69.136	92.837	0.642
recA	Neisseria gonorrhoeae MS11	69.136	92.837	0.642
recA	Neisseria gonorrhoeae strain FA1090	69.136	92.837	0.642
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.112	0.633
recA	Streptococcus pneumoniae Rx1	60.511	100	0.61
recA	Streptococcus pneumoniae TIGR4	60.511	100	0.61
recA	Streptococcus pneumoniae R6	60.511	100	0.61
recA	Streptococcus pneumoniae D39	60.511	100	0.61
recA	Streptococcus mutans UA159	58.571	100	0.587
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.385	93.696	0.585
recA	Helicobacter pylori strain NCTC11637	58.841	98.854	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	91.977	0.582
recA	Streptococcus mitis NCTC 12261	62.848	92.55	0.582
recA	Streptococcus mitis SK321	62.539	92.55	0.579
recA	Helicobacter pylori 26695	58.551	98.854	0.579
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.843	95.129	0.579
recA	Latilactobacillus sakei subsp. sakei 23K	59.88	95.702	0.573
recA	Streptococcus pyogenes NZ131	61.538	93.123	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.182	94.269	0.567
recA	Lactococcus lactis subsp. cremoris KW2	60.991	92.55	0.564