Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   I6G43_RS02005 Genome accession   NZ_CP065706
Coordinates   408635..409783 (+) Length   382 a.a.
NCBI ID   WP_038806436.1    Uniprot ID   A0A7T2ZP03
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 403635..414783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS01980 (I6G43_01980) comM 404531..405154 (+) 624 WP_009014110.1 hypothetical protein Regulator
  I6G43_RS01985 (I6G43_01985) tsaE 405258..405701 (+) 444 WP_000288226.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6G43_RS01990 (I6G43_01990) - 405691..406212 (+) 522 WP_000455526.1 GNAT family N-acetyltransferase -
  I6G43_RS01995 (I6G43_01995) brpA 406217..407251 (+) 1035 WP_009014109.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6G43_RS02000 (I6G43_02000) cinA 407324..408580 (+) 1257 WP_000642699.1 competence/damage-inducible protein A Machinery gene
  I6G43_RS02005 (I6G43_02005) recA 408635..409783 (+) 1149 WP_038806436.1 recombinase RecA Machinery gene
  I6G43_RS02010 (I6G43_02010) - 409840..410394 (-) 555 WP_038806435.1 GNAT family N-acetyltransferase -
  I6G43_RS02015 (I6G43_02015) - 410504..411874 (+) 1371 WP_038806434.1 MATE family efflux transporter -
  I6G43_RS02020 (I6G43_02020) - 411971..412687 (+) 717 WP_038806433.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6G43_RS02025 (I6G43_02025) - 412735..413433 (-) 699 WP_038806432.1 DUF308 domain-containing protein -
  I6G43_RS02030 (I6G43_02030) - 413626..414087 (+) 462 WP_038806431.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 382 a.a.        Molecular weight: 41025.67 Da        Isoelectric Point: 4.8344

>NTDB_id=513202 I6G43_RS02005 WP_038806436.1 408635..409783(+) (recA) [Streptococcus oralis strain FDAARGOS_886]
MAKKPKKLDEISKKFGADREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPSYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
STQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLADHPEVFDEIDHQVRVQYGLIEDEEGTTPTSVAEDLAPNQEVTLDLGDGLEIEIEE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=513202 I6G43_RS02005 WP_038806436.1 408635..409783(+) (recA) [Streptococcus oralis strain FDAARGOS_886]
ATGGCGAAAAAACCAAAAAAATTAGATGAAATTTCAAAAAAATTCGGAGCTGATCGTGAAAAAGCCTTGAACGATGCTCT
GAAATTGATTGAGAAAGACTTTGGTAAAGGCTCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAAGTGCAAGTGATGA
GTTCAGGGTCGTTGGCTCTGGATATTGCTCTTGGTTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGACCA
GAATCATCTGGTAAGACAACGGTTGCCCTTCACGCTGTTGCGCAGGCGCAAAAAGAAGGCGGTATCGCTGCCTTTATCGA
TGCGGAGCATGCCCTTGATCCATCCTATGCAGCAGCCCTTGGTGTGAACATTGACGAATTACTCTTGTCACAACCAGACT
CAGGAGAGCAAGGTCTTGAAATTGCAGGAAAATTGATTGACTCAGGTGCAGTTGACCTTGTCGTTATCGACTCAGTTGCA
GCCCTTGTACCTCGTGCAGAAATTGATGGGGACATTGGAGACAGCCACGTTGGTTTGCAGGCTCGTATGATGAGTCAAGC
CATGCGTAAACTCGGAGCTTCTATCAATAAAACCAAAACAATTGCCATCTTTATCAACCAATTGCGTGAAAAAGTTGGGG
TCATGTTTGGAAATCCAGAAACAACTCCTGGTGGACGTGCTCTGAAATTCTACGCTTCAGTCCGTTTGGATGTTCGTGGA
AGCACACAAATCAAGGGAACTGGTGACCAAAAAGATACCAATGTCGGTAAGGAAACCAAGATCAAGGTCGTGAAAAACAA
GGTGGCTCCGCCATTTAAGGAAGCCTTCGTTGAAATCATGTACGGAGAAGGGATTTCTAAGACCGGTGAGCTTTTGAAGA
TTGCAAGTGATCTCGATATCATCAAAAAAGCAGGAGCTTGGTACTCTTACAAGGATGAAAAGATCGGTCAGGGTTCTGAA
AATGCTAAGAAATACTTGGCAGATCACCCAGAAGTCTTTGATGAGATTGACCATCAAGTCCGTGTTCAATATGGTTTGAT
TGAAGATGAAGAAGGAACAACTCCTACTTCTGTCGCAGAAGATCTAGCACCTAACCAAGAAGTAACGCTTGACCTAGGCG
ATGGACTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T2ZP03

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis SK321

94.01

100

0.945
  recA Streptococcus mitis NCTC 12261

93.75

100

0.942
  recA Streptococcus pneumoniae R6

90.722

100

0.921
  recA Streptococcus pneumoniae TIGR4

90.722

100

0.921
  recA Streptococcus pneumoniae D39

90.722

100

0.921
  recA Streptococcus pneumoniae Rx1

90.722

100

0.921
  recA Streptococcus pyogenes NZ131

84.96

99.215

0.843
  recA Streptococcus mutans UA159

83.77

100

0.838
  recA Lactococcus lactis subsp. cremoris KW2

79.429

91.623

0.728
  recA Latilactobacillus sakei subsp. sakei 23K

67.826

90.314

0.613
  recA Bacillus subtilis subsp. subtilis str. 168

68.485

86.387

0.592
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.777

84.555

0.539
  recA Glaesserella parasuis strain SC1401

60

89.005

0.534
  recA Vibrio cholerae strain A1552

59.012

90.052

0.531
  recA Vibrio cholerae O1 biovar El Tor strain E7946

59.012

90.052

0.531
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.89

85.864

0.531
  recA Neisseria gonorrhoeae MS11

60.606

86.387

0.524
  recA Neisseria gonorrhoeae MS11

60.606

86.387

0.524
  recA Neisseria gonorrhoeae strain FA1090

60.606

86.387

0.524
  recA Acinetobacter baumannii D1279779

61.043

85.34

0.521
  recA Pseudomonas stutzeri DSM 10701

57.225

90.576

0.518
  recA Acinetobacter baylyi ADP1

60.429

85.34

0.516
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.018

89.529

0.51
  recA Ralstonia pseudosolanacearum GMI1000

58.133

86.911

0.505
  recA Helicobacter pylori 26695

57.751

86.126

0.497
  recA Helicobacter pylori strain NCTC11637

57.751

86.126

0.497