Detailed information NTG0043007

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: BDGL_003489
• Genome accession: NC_016603
• Coordinates: 3747912..3748118 (+)
• Length: 68 a.a.
• NCBI ID: YP_004997757.1
• Uniprot ID: F0KNC5
• Organism: Acinetobacter pittii PHEA-2
• Function: dsDNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3742912..3753118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BDGL_003486	relA	3743700..3746006 (+)	2307	YP_004997754.1	GTP pyrophosphokinase	-
BDGL_003487	-	3746053..3746826 (-)	774	YP_004997755.1	short-chain dehydrogenase	-
BDGL_003488	mazG	3746939..3747745 (+)	807	YP_004997756.1	nucleoside triphosphate pyrophosphohydrolase	-
BDGL_003489	comEA	3747912..3748118 (+)	207	YP_004997757.1	competence protein ComEA	Machinery gene
BDGL_003490	pcnB	3748310..3749707 (+)	1398	YP_004997758.1	poly(A) polymerase I (PAP)	-
BDGL_003491	folK	3749704..3750186 (+)	483	YP_004997759.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	-
BDGL_003492	panB	3750232..3751041 (+)	810	YP_004997760.1	3-methyl-2-oxobutanoate hydroxymethyltransferase	-
BDGL_003493	panC	3751045..3751893 (+)	849	YP_004997761.1	pantoate--beta-alanine ligase	-
BDGL_003494	-	3751935..3752768 (+)	834	YP_004997762.1	hypothetical protein	-
BDGL_003495	ptsO	3752723..3753034 (+)	312	YP_004997763.1	phosphocarrier protein (HPr-like) NPr, nitrogen related, exchanges phosphate with enzyme I	-

Sequence

Protein

• Length: 68 a.a.
• Molecular weight: 7589.72 Da
• Isoelectric Point: 10.2944

>NTDB_id=43007 BDGL_003489 YP_004997757.1 3747912..3748118(+) (comEA) [Acinetobacter pittii PHEA-2]
MTDSSGQIHLNQANIDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKSRMAL

Nucleotide

• Length: 207 bp

>NTDB_id=43007 BDGL_003489 YP_004997757.1 3747912..3748118(+) (comEA) [Acinetobacter pittii PHEA-2]
ATGACTGATTCGTCAGGGCAAATTCACTTGAATCAAGCCAATATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAA
AAAGGCTCAGGCAATTGTGGAATACCGTCAAAAGAATGGTGGCTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGCA
TTGGTCCAGCCATTTTTGAAAAGAATAAATCACGGATGGCTTTATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (5-65)

3D structure

• AlphaFold DB: F0KNC5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Acinetobacter baumannii D1279779	85.294	100	0.853
comEA	Acinetobacter baumannii strain A118	83.824	100	0.838
comEA	Vibrio cholerae C6706	53.226	91.176	0.485
comEA	Vibrio cholerae strain A1552	53.226	91.176	0.485
comEA	Acinetobacter baylyi ADP1	54.098	89.706	0.485
comEA/comE1	Glaesserella parasuis strain SC1401	51.613	91.176	0.471
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.206	92.647	0.456
comE1/comEA	Haemophilus influenzae Rd KW20	49.206	92.647	0.456
comEA	Vibrio parahaemolyticus RIMD 2210633	49.206	92.647	0.456
comE	Neisseria gonorrhoeae MS11	50	88.235	0.441
comE	Neisseria gonorrhoeae MS11	50	88.235	0.441
comE	Neisseria gonorrhoeae MS11	50	88.235	0.441
comE	Neisseria gonorrhoeae MS11	50	88.235	0.441
comEA	Vibrio campbellii strain DS40M4	48.387	91.176	0.441
comEA	Latilactobacillus sakei subsp. sakei 23K	44.776	98.529	0.441
comEA	Lactococcus lactis subsp. cremoris KW2	44.776	98.529	0.441
comEA/celA/cilE	Streptococcus mitis NCTC 12261	41.791	98.529	0.412
comEA	Staphylococcus aureus MW2	45.161	91.176	0.412
comEA	Staphylococcus aureus N315	45.161	91.176	0.412
comEA/celA/cilE	Streptococcus mitis SK321	45.161	91.176	0.412
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	43.548	91.176	0.397
comEA/celA/cilE	Streptococcus pneumoniae D39	43.548	91.176	0.397
comEA/celA/cilE	Streptococcus pneumoniae R6	43.548	91.176	0.397
comEA	Legionella pneumophila strain ERS1305867	43.548	91.176	0.397
comEA/celA/cilE	Streptococcus pneumoniae Rx1	43.548	91.176	0.397
comEA	Legionella pneumophila str. Paris	43.548	91.176	0.397
comEA	Bacillus subtilis subsp. subtilis str. 168	42.623	89.706	0.382
comEA	Streptococcus thermophilus LMD-9	44.643	82.353	0.368