Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | M594_RS08900 | Genome accession | NZ_CP047883 |
| Coordinates | 1859895..1861049 (-) | Length | 384 a.a. |
| NCBI ID | WP_173876607.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain S022-V3-A4 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1811823..1863358 | 1859895..1861049 | within | 0 |
Gene organization within MGE regions
Location: 1811823..1863358
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M594_RS08655 (M594_08695) | fusA | 1812022..1814103 (-) | 2082 | WP_000090350.1 | elongation factor G | - |
| M594_RS08660 (M594_08700) | rpsG | 1814413..1814883 (-) | 471 | WP_000087873.1 | 30S ribosomal protein S7 | - |
| M594_RS08665 (M594_08705) | rpsL | 1814903..1815316 (-) | 414 | WP_001142332.1 | 30S ribosomal protein S12 | - |
| M594_RS08670 (M594_08715) | - | 1815630..1816229 (-) | 600 | WP_173876584.1 | response regulator transcription factor | - |
| M594_RS08675 (M594_08720) | - | 1816231..1817328 (-) | 1098 | WP_173876585.1 | sensor histidine kinase | - |
| M594_RS08680 (M594_08725) | - | 1817328..1818065 (-) | 738 | WP_173876586.1 | ABC transporter permease | - |
| M594_RS08685 (M594_08730) | - | 1818067..1818951 (-) | 885 | WP_173876587.1 | ABC transporter ATP-binding protein | - |
| M594_RS08690 (M594_08735) | - | 1818938..1819132 (-) | 195 | WP_004262077.1 | hypothetical protein | - |
| M594_RS08695 (M594_08740) | - | 1819129..1819335 (-) | 207 | WP_004262079.1 | hypothetical protein | - |
| M594_RS08700 (M594_08745) | - | 1819460..1821127 (-) | 1668 | WP_173876588.1 | DAK2 domain-containing protein | - |
| M594_RS08705 (M594_08750) | - | 1821130..1821495 (-) | 366 | WP_000216437.1 | Asp23/Gls24 family envelope stress response protein | - |
| M594_RS08710 (M594_08755) | rpmB | 1821651..1821839 (-) | 189 | WP_001140948.1 | 50S ribosomal protein L28 | - |
| M594_RS08715 (M594_08760) | - | 1822095..1822223 (-) | 129 | WP_173876589.1 | thiamine biosynthesis protein ThiS | - |
| M594_RS08720 (M594_08765) | - | 1822279..1823571 (-) | 1293 | WP_173876590.1 | ISLre2 family transposase | - |
| M594_RS08725 (M594_08770) | - | 1823699..1823926 (-) | 228 | WP_173876591.1 | hypothetical protein | - |
| M594_RS08730 (M594_08775) | - | 1823979..1824785 (-) | 807 | WP_173876592.1 | ParA family protein | - |
| M594_RS08735 (M594_08780) | - | 1824967..1826601 (-) | 1635 | WP_125452402.1 | relaxase/mobilization nuclease domain-containing protein | - |
| M594_RS08740 (M594_08785) | mobC | 1826595..1826987 (-) | 393 | WP_001171916.1 | plasmid mobilization relaxosome protein MobC | - |
| M594_RS08745 (M594_08790) | - | 1827205..1827621 (-) | 417 | WP_042768467.1 | hypothetical protein | - |
| M594_RS08750 (M594_08795) | - | 1827692..1832017 (-) | 4326 | WP_173876593.1 | PBECR4 domain-containing protein | - |
| M594_RS08755 (M594_08800) | - | 1832008..1832271 (-) | 264 | WP_173876594.1 | hypothetical protein | - |
| M594_RS08760 (M594_08805) | - | 1832292..1834091 (-) | 1800 | WP_173876595.1 | VirD4-like conjugal transfer protein, CD1115 family | - |
| M594_RS08765 (M594_08810) | - | 1834088..1834606 (-) | 519 | WP_173876596.1 | hypothetical protein | - |
| M594_RS08770 (M594_08815) | - | 1834619..1835458 (-) | 840 | WP_049493164.1 | hypothetical protein | - |
| M594_RS08775 (M594_08820) | - | 1835412..1835684 (-) | 273 | WP_049493165.1 | hypothetical protein | - |
| M594_RS08780 (M594_08825) | - | 1835681..1836325 (-) | 645 | WP_173876597.1 | hypothetical protein | - |
| M594_RS08785 (M594_08830) | - | 1836345..1838981 (-) | 2637 | WP_173876598.1 | phage tail tip lysozyme | - |
| M594_RS08790 (M594_08835) | - | 1839008..1841362 (-) | 2355 | WP_173876599.1 | VirB4-like conjugal transfer ATPase, CD1110 family | - |
| M594_RS08795 (M594_08840) | - | 1841322..1841669 (-) | 348 | WP_000197454.1 | PrgI family mobile element protein | - |
| M594_RS08800 (M594_08845) | - | 1841717..1842190 (-) | 474 | WP_049493172.1 | hypothetical protein | - |
| M594_RS08805 (M594_08850) | - | 1842206..1842544 (-) | 339 | WP_239665262.1 | hypothetical protein | - |
| M594_RS08810 (M594_08855) | - | 1842669..1843415 (-) | 747 | WP_049493176.1 | hypothetical protein | - |
| M594_RS08815 (M594_08860) | - | 1843443..1843667 (-) | 225 | WP_000340303.1 | hypothetical protein | - |
| M594_RS08820 (M594_08865) | - | 1843741..1844229 (-) | 489 | WP_173876600.1 | hypothetical protein | - |
| M594_RS08825 (M594_08870) | - | 1844293..1848000 (-) | 3708 | WP_049547337.1 | SspB-related isopeptide-forming adhesin | - |
| M594_RS08830 (M594_08875) | - | 1848022..1848831 (-) | 810 | WP_049491935.1 | LPXTG cell wall anchor domain-containing protein | - |
| M594_RS08835 (M594_08880) | - | 1848848..1849156 (-) | 309 | WP_000564688.1 | hypothetical protein | - |
| M594_RS08840 (M594_08885) | - | 1849446..1849661 (-) | 216 | WP_049491932.1 | helix-turn-helix transcriptional regulator | - |
| M594_RS10180 | - | 1849664..1849798 (-) | 135 | WP_000475613.1 | hypothetical protein | - |
| M594_RS08845 (M594_08890) | - | 1849822..1850088 (-) | 267 | WP_000522441.1 | hypothetical protein | - |
| M594_RS08850 | - | 1850093..1850260 (-) | 168 | WP_000910111.1 | hypothetical protein | - |
| M594_RS08855 (M594_08895) | - | 1850254..1851330 (-) | 1077 | WP_049491929.1 | replication initiator protein A | - |
| M594_RS08860 (M594_08900) | - | 1851617..1852291 (-) | 675 | WP_173876601.1 | LiaF transmembrane domain-containing protein | - |
| M594_RS08865 (M594_08905) | - | 1852296..1852742 (-) | 447 | WP_000776606.1 | LytTR family DNA-binding domain-containing protein | - |
| M594_RS08870 (M594_08910) | - | 1852856..1853359 (-) | 504 | WP_173876602.1 | phosphatase PAP2 family protein | - |
| M594_RS08875 (M594_08915) | rcrQ | 1853455..1855215 (-) | 1761 | WP_173876603.1 | ABC transporter ATP-binding protein | Regulator |
| M594_RS08880 (M594_08920) | rcrP | 1855205..1856974 (-) | 1770 | WP_173876604.1 | ABC transporter ATP-binding protein | Regulator |
| M594_RS08885 (M594_08925) | - | 1856949..1857419 (-) | 471 | WP_173876605.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| M594_RS08890 (M594_08930) | - | 1857597..1858313 (-) | 717 | WP_000532877.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| M594_RS08895 (M594_08935) | - | 1858410..1859780 (-) | 1371 | WP_173876606.1 | MATE family efflux transporter | - |
| M594_RS08900 (M594_08940) | recA | 1859895..1861049 (-) | 1155 | WP_173876607.1 | recombinase RecA | Machinery gene |
| M594_RS08905 (M594_08945) | cinA | 1861104..1862360 (-) | 1257 | WP_173876608.1 | competence/damage-inducible protein A | Machinery gene |
Sequence
Protein
Download Length: 384 a.a. Molecular weight: 41317.02 Da Isoelectric Point: 4.7552
>NTDB_id=418277 M594_RS08900 WP_173876607.1 1859895..1861049(-) (recA) [Streptococcus mitis strain S022-V3-A4]
MAKKPKKLDEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
STQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAENPEVFDEIDHQVRVQFGLIDGEEVAETKKDEAVQADSVNEEVTLDLGDELEIEIEE
MAKKPKKLDEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
STQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAENPEVFDEIDHQVRVQFGLIDGEEVAETKKDEAVQADSVNEEVTLDLGDELEIEIEE
Nucleotide
Download Length: 1155 bp
>NTDB_id=418277 M594_RS08900 WP_173876607.1 1859895..1861049(-) (recA) [Streptococcus mitis strain S022-V3-A4]
ATGGCGAAAAAACCAAAAAAATTAGATGAAATTTCAAAAAAATTCGGGGCAGAACGAGAAAAAGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAGGGTTCAATCATGCGTTTGGGTGAACGTGCCGAGCAAAAGGTTCAAGTGATGA
GCTCAGGTTCTTTGGCTCTTGATATTGCCCTTGGTTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTACGGACCA
GAGTCATCTGGTAAGACGACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGTATTGCAGCCTTTATCGA
TGCGGAACATGCCCTCGATCCAGCTTATGCTGCGGCCCTTGGGGTCAACATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCAGGAAAATTGATTGACTCAGGTGCTGTAGATCTTGTCGTGGTCGACTCAGTTGCG
GCCCTTGTCCCTCGTGCAGAAATTGATGGAGATATCGGAGATAGCCACGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
TATGCGTAAGCTCGGTGCTTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTACGTGAAAAAGTTGGGG
TCATGTTTGGAAATCCAGAAACAACTCCTGGTGGACGTGCTCTGAAATTCTACGCATCAGTCCGTTTGGATGTTCGTGGA
AGCACACAGATCAAGGGAACTGGTGACCAAAAAGATACCAATGTCGGTAAAGAAACCAAGATCAAGGTCGTGAAAAACAA
GGTGGCTCCACCATTTAAGGAAGCCTTCGTTGAAATCATGTACGGAGAAGGGATTTCTAAGACGGGTGAACTCTTGAAAA
TCGCAAGCGATTTGGATATCATCAAAAAAGCAGGTGCTTGGTACTCTTACAAGGATGAGAAAATCGGGCAAGGTTCTGAA
AATGCTAAGAAATACTTGGCAGAAAACCCAGAAGTCTTTGATGAGATTGACCATCAAGTCCGTGTTCAATTTGGTTTGAT
TGATGGAGAAGAAGTTGCTGAAACTAAAAAAGATGAGGCGGTCCAAGCAGACTCTGTGAATGAAGAAGTAACTCTTGACC
TAGGCGATGAGCTTGAAATCGAAATTGAAGAATAA
ATGGCGAAAAAACCAAAAAAATTAGATGAAATTTCAAAAAAATTCGGGGCAGAACGAGAAAAAGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAGGGTTCAATCATGCGTTTGGGTGAACGTGCCGAGCAAAAGGTTCAAGTGATGA
GCTCAGGTTCTTTGGCTCTTGATATTGCCCTTGGTTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTACGGACCA
GAGTCATCTGGTAAGACGACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGTATTGCAGCCTTTATCGA
TGCGGAACATGCCCTCGATCCAGCTTATGCTGCGGCCCTTGGGGTCAACATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCAGGAAAATTGATTGACTCAGGTGCTGTAGATCTTGTCGTGGTCGACTCAGTTGCG
GCCCTTGTCCCTCGTGCAGAAATTGATGGAGATATCGGAGATAGCCACGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
TATGCGTAAGCTCGGTGCTTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTACGTGAAAAAGTTGGGG
TCATGTTTGGAAATCCAGAAACAACTCCTGGTGGACGTGCTCTGAAATTCTACGCATCAGTCCGTTTGGATGTTCGTGGA
AGCACACAGATCAAGGGAACTGGTGACCAAAAAGATACCAATGTCGGTAAAGAAACCAAGATCAAGGTCGTGAAAAACAA
GGTGGCTCCACCATTTAAGGAAGCCTTCGTTGAAATCATGTACGGAGAAGGGATTTCTAAGACGGGTGAACTCTTGAAAA
TCGCAAGCGATTTGGATATCATCAAAAAAGCAGGTGCTTGGTACTCTTACAAGGATGAGAAAATCGGGCAAGGTTCTGAA
AATGCTAAGAAATACTTGGCAGAAAACCCAGAAGTCTTTGATGAGATTGACCATCAAGTCCGTGTTCAATTTGGTTTGAT
TGATGGAGAAGAAGTTGCTGAAACTAAAAAAGATGAGGCGGTCCAAGCAGACTCTGTGAATGAAGAAGTAACTCTTGACC
TAGGCGATGAGCTTGAAATCGAAATTGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.