Detailed information NTG0313503

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: D2E16_RS00385
• Genome accession: NZ_CP032064
• Coordinates: 76385..77536 (+)
• Length: 383 a.a.
• NCBI ID: WP_192369293.1
• Uniprot ID: -
• Organism: Streptococcus suis strain YSJ17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 71385..82536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D2E16_RS00365 (D2E16_00385)	mutL	71706..73643 (+)	1938	WP_192369290.1	DNA mismatch repair endonuclease MutL	-
D2E16_RS00370 (D2E16_00390)	ruvA	73682..74272 (+)	591	WP_136648117.1	Holliday junction branch migration protein RuvA	-
D2E16_RS00375 (D2E16_00395)	-	74546..75115 (+)	570	WP_192369291.1	DNA-3-methyladenine glycosylase I	-
D2E16_RS00380 (D2E16_00400)	cinA	75152..76333 (+)	1182	WP_192369292.1	competence/damage-inducible protein A	Machinery gene
D2E16_RS00385 (D2E16_00405)	recA	76385..77536 (+)	1152	WP_192369293.1	recombinase RecA	Machinery gene
D2E16_RS00390 (D2E16_00410)	spx	77695..78093 (+)	399	WP_105108276.1	transcriptional regulator Spx	-
D2E16_RS00395 (D2E16_00415)	-	78199..78465 (+)	267	WP_105108277.1	IreB family regulatory phosphoprotein	-
D2E16_RS00400 (D2E16_00420)	ruvX	78465..78884 (+)	420	WP_192369294.1	Holliday junction resolvase RuvX	-
D2E16_RS00405 (D2E16_00425)	-	78896..79213 (+)	318	WP_192369295.1	DUF1292 domain-containing protein	-
D2E16_RS00410 (D2E16_00430)	-	79467..80027 (+)	561	WP_192369296.1	nucleotidyltransferase family protein	-
D2E16_RS00415 (D2E16_00435)	comX/sigX	80117..80587 (+)	471	WP_192369297.1	sigma-70 family RNA polymerase sigma factor	Regulator
D2E16_RS00420 (D2E16_00440)	rpsJ	80854..81162 (+)	309	WP_014735259.1	30S ribosomal protein S10	-
D2E16_RS00425 (D2E16_00445)	rplC	81259..81885 (+)	627	WP_011921686.1	50S ribosomal protein L3	-
D2E16_RS00430 (D2E16_00450)	rplD	81910..82533 (+)	624	WP_004195490.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 40974.78 Da
• Isoelectric Point: 4.8910

>NTDB_id=313503 D2E16_RS00385 WP_192369293.1 76385..77536(+) (recA) [Streptococcus suis strain YSJ17]
MAKKPTKKLEDITKKFGDERKKALDDALKSIEKDFGKGAVMRLGERAEQKVQVMSSGSLSIDIALGAGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKDGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSV
AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTVAIFINQLREKVGVMFGNPETTPGGRALKFYASVRMDVR
GNTQIKGTGDKKDQNVGKETKVKIVKNKVAPPFKEVVVEIMYGEGISRTGELIEIGSNLGIIQKAGAWYSYNGEKIGQGS
ENAKKFLADNPVIFDEIDRKIRIHYGLIEADGVEEVVTEEAPVAAEEIQDVILDLDGGIELED

Nucleotide

• Length: 1152 bp

>NTDB_id=313503 D2E16_RS00385 WP_192369293.1 76385..77536(+) (recA) [Streptococcus suis strain YSJ17]
TTGGCTAAGAAACCAACTAAGAAATTAGAAGATATTACAAAGAAATTTGGTGATGAGCGTAAAAAAGCGCTGGATGATGC
CCTAAAATCAATTGAAAAAGATTTTGGTAAGGGCGCCGTCATGCGTCTTGGTGAGCGTGCTGAGCAAAAAGTTCAAGTCA
TGAGTTCAGGTAGCTTGTCAATCGACATTGCGCTTGGAGCGGGTGGCTATCCGAAGGGGCGTATCATTGAGATTTACGGT
CCAGAGAGCTCAGGTAAGACAACTGTTGCCCTTCATGCAGTAGCTCAAGCCCAGAAAGATGGCGGTATTGCTGCCTTTAT
CGATGCGGAACATGCCTTGGATCCAGCCTATGCAGCAGCCTTAGGGGTAAATATTGATGAATTACTTTTGTCGCAACCAG
ATTCAGGGGAACAAGGTCTTGAAATCGCCGGCAAGTTGATCGACTCTGGTGCGGTTGATTTGGTTGTTGTGGACTCGGTT
GCAGCCCTGGTACCTCGTGCAGAAATCGATGGCGATATCGGTGATAGCCACGTTGGTTTGCAGGCACGTATGATGAGTCA
GGCCATGCGTAAACTCGGTGCATCTATTAACAAAACGAAGACCGTAGCCATTTTCATTAACCAATTGCGTGAAAAAGTCG
GTGTCATGTTTGGCAACCCTGAAACAACGCCTGGTGGTCGTGCACTGAAATTCTATGCCTCTGTCCGTATGGATGTTCGT
GGAAACACACAAATCAAAGGAACAGGCGACAAGAAAGATCAAAATGTTGGTAAGGAGACCAAGGTCAAGATTGTGAAGAA
CAAGGTGGCTCCTCCATTTAAAGAAGTAGTTGTTGAAATCATGTATGGTGAAGGAATTTCTCGCACAGGTGAATTGATTG
AGATTGGTAGCAACCTCGGTATCATCCAAAAAGCAGGTGCTTGGTATTCATATAATGGAGAAAAAATTGGCCAAGGTTCT
GAAAATGCTAAGAAATTCTTAGCAGATAATCCAGTAATCTTTGATGAAATTGACCGCAAGATTCGTATTCATTATGGCTT
GATTGAAGCAGATGGAGTTGAAGAGGTTGTGACCGAAGAAGCCCCTGTTGCTGCGGAAGAGATCCAAGATGTTATCCTAG
ATCTTGATGGCGGTATTGAATTAGAAGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (22-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Streptococcus mutans UA159	85.417	100	0.856
recA	Streptococcus pyogenes NZ131	84.856	100	0.849
recA	Streptococcus pneumoniae D39	82.902	100	0.836
recA	Streptococcus pneumoniae R6	82.902	100	0.836
recA	Streptococcus pneumoniae Rx1	82.902	100	0.836
recA	Streptococcus pneumoniae TIGR4	82.902	100	0.836
recA	Streptococcus mitis NCTC 12261	82.984	99.739	0.828
recA	Streptococcus mitis SK321	82.199	99.739	0.82
recA	Lactococcus lactis subsp. cremoris KW2	74.857	91.384	0.684
recA	Latilactobacillus sakei subsp. sakei 23K	63.305	93.211	0.59
recA	Bacillus subtilis subsp. subtilis str. 168	67.781	85.901	0.582
recA	Neisseria gonorrhoeae MS11	60.933	89.556	0.546
recA	Neisseria gonorrhoeae MS11	60.933	89.556	0.546
recA	Neisseria gonorrhoeae strain FA1090	60.933	89.556	0.546
recA	Acinetobacter baumannii D1279779	59.827	90.339	0.54
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.238	89.034	0.527
recA	Glaesserella parasuis strain SC1401	59.412	88.773	0.527
recA	Pseudomonas stutzeri DSM 10701	56.941	92.167	0.525
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.18	87.206	0.525
recA	Vibrio cholerae strain A1552	61.231	84.856	0.52
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.231	84.856	0.52
recA	Acinetobacter baylyi ADP1	61.231	84.856	0.52
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.308	86.423	0.504
recA	Ralstonia pseudosolanacearum GMI1000	60.252	82.768	0.499
recA	Helicobacter pylori 26695	57.669	85.117	0.491
recA	Helicobacter pylori strain NCTC11637	57.669	85.117	0.491