Detailed information NTG0283967

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: C7M34_RS16930
• Genome accession: NZ_CP028275
• Coordinates: 3127025..3127189 (-)
• Length: 54 a.a.
• NCBI ID: WP_262352644.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain SRCM100995
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3122025..3132189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M34_RS14775 (C7M34_02976)	rpsO	3122254..3122523 (-)	270	WP_003639022.1	30S ribosomal protein S15	-
C7M34_RS14780 (C7M34_02977)	rpsT	3122751..3123005 (+)	255	WP_003645660.1	30S ribosomal protein S20	-
C7M34_RS14785 (C7M34_02978)	holA	3123181..3124242 (-)	1062	WP_044431081.1	DNA polymerase III subunit delta	-
C7M34_RS14790 (C7M34_02979)	-	3124193..3126484 (-)	2292	WP_160248069.1	DNA internalization-related competence protein ComEC/Rec2	-
C7M34_RS14795 (C7M34_02980)	-	3126485..3126970 (-)	486	WP_003645663.1	ComE operon protein 2	-
C7M34_RS16930	comEA	3127025..3127189 (-)	165	WP_262352644.1	helix-hairpin-helix domain-containing protein	Machinery gene
C7M34_RS14800 (C7M34_02981)	-	3127265..3127750 (-)	486	WP_262352645.1	SLBB domain-containing protein	-
C7M34_RS14805 (C7M34_02982)	-	3127853..3128899 (-)	1047	WP_003640808.1	SepM family pheromone-processing serine protease	-
C7M34_RS14810 (C7M34_02983)	coaD	3128892..3129383 (-)	492	WP_003644584.1	pantetheine-phosphate adenylyltransferase	-
C7M34_RS14815 (C7M34_02984)	rsmD	3129387..3129950 (-)	564	WP_003644585.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
C7M34_RS14820 (C7M34_02985)	-	3129966..3130268 (-)	303	WP_063722182.1	YlbG family protein	-

Sequence

Protein

• Length: 54 a.a.
• Molecular weight: 6026.91 Da
• Isoelectric Point: 10.0061

>NTDB_id=283967 C7M34_RS16930 WP_262352644.1 3127025..3127189(-) (comEA) [Lactiplantibacillus plantarum strain SRCM100995]
MAALQTLSGIGQKKAEKIIDYRQQHGNFKTIDDLKNVSGFGEKTVAKYKDQLTV

Nucleotide

• Length: 165 bp

>NTDB_id=283967 C7M34_RS16930 WP_262352644.1 3127025..3127189(-) (comEA) [Lactiplantibacillus plantarum strain SRCM100995]
GTGGCCGCGTTGCAAACGTTGAGCGGAATCGGGCAGAAGAAAGCTGAAAAAATCATTGATTATCGCCAGCAACATGGTAA
TTTTAAAACAATTGATGATTTGAAAAACGTCAGTGGCTTTGGAGAAAAGACTGTGGCCAAATACAAAGACCAGCTCACCG
TCTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (2-53)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Streptococcus thermophilus LMD-9	58.824	94.444	0.556
comEA	Lactococcus lactis subsp. cremoris KW2	55.556	100	0.556
comEA	Latilactobacillus sakei subsp. sakei 23K	54.902	94.444	0.519
comEA	Bacillus subtilis subsp. subtilis str. 168	52.941	94.444	0.5
comEA	Vibrio parahaemolyticus RIMD 2210633	56.522	85.185	0.481
comEA/celA/cilE	Streptococcus pneumoniae Rx1	48.148	100	0.481
comEA/celA/cilE	Streptococcus mitis NCTC 12261	48.148	100	0.481
comEA/celA/cilE	Streptococcus mitis SK321	48.148	100	0.481
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	48.148	100	0.481
comEA/celA/cilE	Streptococcus pneumoniae D39	48.148	100	0.481
comEA/celA/cilE	Streptococcus pneumoniae R6	48.148	100	0.481
comEA	Staphylococcus aureus N315	48.148	100	0.481
comEA	Staphylococcus aureus MW2	48.148	100	0.481
comE	Neisseria gonorrhoeae MS11	50.98	94.444	0.481
comE	Neisseria gonorrhoeae MS11	50.98	94.444	0.481
comE	Neisseria gonorrhoeae MS11	50.98	94.444	0.481
comE	Neisseria gonorrhoeae MS11	50.98	94.444	0.481
comEA	Acinetobacter baylyi ADP1	49.02	94.444	0.463
comEA	Acinetobacter baumannii D1279779	49.02	94.444	0.463
comEA	Vibrio campbellii strain DS40M4	54.348	85.185	0.463
comEA	Acinetobacter baumannii strain A118	47.059	94.444	0.444
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.059	94.444	0.444
comEA	Vibrio cholerae C6706	61.538	72.222	0.444
comEA	Vibrio cholerae strain A1552	61.538	72.222	0.444
comE1/comEA	Haemophilus influenzae Rd KW20	45.833	88.889	0.407
comEA/comE1	Glaesserella parasuis strain SC1401	41.667	88.889	0.37
comEA	Legionella pneumophila strain ERS1305867	42.553	87.037	0.37
comEA	Legionella pneumophila str. Paris	42.553	87.037	0.37