Detailed information NTG1116097

Bioinformatically predicted

Overview

• Name: comEA/celA/cilE
• Type: Machinery gene
• Locus tag: E7X43_RS09315
• Genome accession: NZ_LR031358
• Coordinates: 876273..876389 (+)
• Length: 38 a.a.
• NCBI ID: WP_243114866.1
• Uniprot ID: -
• Organism: Oenococcus oeni strain CRBO_1381
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 871273..881389

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E7X43_RS04425 (OENI_0942)	-	871694..872620 (+)	927	WP_071419841.1	hypothetical protein	-
E7X43_RS04435 (OENI_0943)	-	872746..873261 (+)	516	WP_002816328.1	hypothetical protein	-
E7X43_RS04440 (OENI_0944)	rplU	873382..873684 (+)	303	WP_002820507.1	50S ribosomal protein L21	-
E7X43_RS04445 (OENI_0945)	rpmA	873696..874016 (+)	321	WP_071419842.1	50S ribosomal protein L27	-
E7X43_RS04450 (OENI_0946)	-	874068..875156 (+)	1089	WP_071419843.1	aminopeptidase P family protein	-
E7X43_RS04455 (OENI_0947)	-	875159..875665 (+)	507	WP_002817088.1	phosphoesterase	-
E7X43_RS09310 (OENI_0948)	-	875755..876276 (+)	522	WP_243114861.1	SLBB domain-containing protein	-
E7X43_RS09315	comEA/celA/cilE	876273..876389 (+)	117	WP_243114866.1	helix-hairpin-helix domain-containing protein	Machinery gene
E7X43_RS04465 (OENI_0950)	-	877018..878681 (+)	1664	Protein_878	DNA internalization-related competence protein ComEC/Rec2	-
E7X43_RS04470 (OENI_0951)	holA	878668..879663 (+)	996	WP_071419845.1	DNA polymerase III subunit delta	-
E7X43_RS04475 (OENI_0952)	-	879660..880505 (-)	846	WP_002820497.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 38 a.a.
• Molecular weight: 4493.16 Da
• Isoelectric Point: 8.5420

>NTDB_id=1116097 E7X43_RS09315 WP_243114866.1 876273..876389(+) (comEA/celA/cilE) [Oenococcus oeni strain CRBO_1381]
MVKYREEHGKFKSIDDLKNISGFGDKTVEKLNDYVFIK

Nucleotide

• Length: 117 bp

>NTDB_id=1116097 E7X43_RS09315 WP_243114866.1 876273..876389(+) (comEA/celA/cilE) [Oenococcus oeni strain CRBO_1381]
ATAGTAAAATATCGCGAAGAACATGGGAAATTTAAATCAATTGATGATTTAAAAAATATCTCCGGTTTTGGAGATAAAAC
GGTTGAAAAATTGAACGATTATGTCTTTATTAAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (1-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA/celA/cilE	Streptococcus pneumoniae Rx1	56.757	97.368	0.553
comEA/celA/cilE	Streptococcus mitis SK321	56.757	97.368	0.553
comEA/celA/cilE	Streptococcus mitis NCTC 12261	56.757	97.368	0.553
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	56.757	97.368	0.553
comEA/celA/cilE	Streptococcus pneumoniae D39	56.757	97.368	0.553
comEA/celA/cilE	Streptococcus pneumoniae R6	56.757	97.368	0.553
comEA	Lactococcus lactis subsp. cremoris KW2	54.054	97.368	0.526
comEA	Staphylococcus aureus N315	51.351	97.368	0.5
comEA	Staphylococcus aureus MW2	51.351	97.368	0.5
comEA	Streptococcus thermophilus LMD-9	51.351	97.368	0.5
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	45.946	97.368	0.447
comEA	Acinetobacter baylyi ADP1	45.946	97.368	0.447
comEA	Latilactobacillus sakei subsp. sakei 23K	43.243	97.368	0.421
comEA	Vibrio campbellii strain DS40M4	43.243	97.368	0.421
comEA	Vibrio parahaemolyticus RIMD 2210633	43.243	97.368	0.421
comEA/comE1	Glaesserella parasuis strain SC1401	42.105	100	0.421
comEA	Bacillus subtilis subsp. subtilis str. 168	39.474	100	0.395
comEA	Vibrio cholerae strain A1552	53.571	73.684	0.395
comEA	Vibrio cholerae C6706	53.571	73.684	0.395
comEA	Acinetobacter baumannii strain A118	46.667	78.947	0.368
comEA	Acinetobacter baumannii D1279779	46.667	78.947	0.368
comE1/comEA	Haemophilus influenzae Rd KW20	38.889	94.737	0.368
comE	Neisseria gonorrhoeae MS11	42.424	86.842	0.368
comE	Neisseria gonorrhoeae MS11	42.424	86.842	0.368
comE	Neisseria gonorrhoeae MS11	42.424	86.842	0.368
comE	Neisseria gonorrhoeae MS11	42.424	86.842	0.368