Escherichia coli strain SHP241

TA loci of Escherichia coli strain SHP24

Number of TA loci: experimental0; insolico26

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA259157 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS01415 (yafQ) N6H17_RS01420 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA259158 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS01455 (yafO) N6H17_RS01450 (yafN) yafN-yafO (relBE)/YafO-YafN
in_silico TA259159 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS02555 (Hha) N6H17_RS02560 (TomB) Hha-TomB/-
in_silico TA259160 Prophage Prophage Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS06395 (parE_1) N6H17_RS06400 (paaA) paaR-paaA-parE/-
in_silico TA259161 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS08185 (hicA) N6H17_RS08190 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA259162 GI Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS08555 (hipA) N6H17_RS08560 (hipB) hipBA/HipA-HipB
in_silico TA259163 Prophage Prophage Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS08880 (relE) N6H17_RS08885 (relB) relBE/ParE-RelB
in_silico TA259168 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS11525 (yoeB) N6H17_RS11530 (yefM) yefM-yoeB (relBE)/YoeB-YefM
in_silico TA259169 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS15205 (mazF) N6H17_RS15210 (mazE) mazEF/PRK09907-MazE
in_silico TA259172 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS17030 (higB) N6H17_RS17025 (higA) higBA (relBE)/HigB-HigA
in_silico TA259173 GI Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS17255 (yhaV) N6H17_RS17250 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA259176 - Escherichia coli strain SHP24 (chromosome) NZ_CP104788 N6H17_RS23465 (shpA) N6H17_RS23470 (shpB) shpAB/BrnT-BrnA
in_silico TA259177 Plasmid Escherichia coli strain SHP24 (plasmid pHNSHP24-1) NZ_CP104789 N6H17_RS24480 (hipA) N6H17_RS24485 (hipB) hipBA/HipA-HipB
in_silico TA259178 Plasmid Escherichia coli strain SHP24 (plasmid pHNSHP24-2) NZ_CP104790 N6H17_RS25185 (tacT) N6H17_RS25180 (tacA) tacAT/ElaA-DUF1778
in_silico TA259179 Plasmid IScluster/Tn Escherichia coli strain SHP24 (plasmid pHNSHP24-2) NZ_CP104790 N6H17_RS25440 (relE) N6H17_RS25435 (relB) relBE/ParE-YafN
in_silico TA259180 Plasmid IScluster/Tn Escherichia coli strain SHP24 (plasmid pHNSHP24-2) NZ_CP104790 N6H17_RS25465 (vapC) N6H17_RS25470 (vapB) vapBC/VapC-VagC
in_silico TA259181 Plasmid Escherichia coli strain SHP24 (plasmid pHNSHP24-2) NZ_CP104790 N6H17_RS25610 (relE) N6H17_RS25615 (relB) relBE/RHH(antitoxin)
in_silico TA259184 Plasmid Escherichia coli strain SHP24 (plasmid pHNSHP24-2) NZ_CP104790 N6H17_RS26110 (vapC) N6H17_RS26115 (vapB) vapBC/VapC-VagC
in_silico TA259187 Plasmid Escherichia coli strain SHP24 (plasmid pHNSHP24-3) NZ_CP104791 N6H17_RS26390 (doc) N6H17_RS26395 (phd) phd-doc/Doc-Phd
experimentalExperimentally validated     insolicoBioinformatically predicted