MGE detailed information
MGE type: Prophage MGE length: 62311 bp
Accession: NZ_CP104788 Location: 1285657..1347967 Organism: Escherichia coli strain SHP24 Replicon: chromosome
Accession: NZ_CP104788 Location: 1285657..1347967 Organism: Escherichia coli strain SHP24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6H17_RS06305 (1283130) | 1283130..1284203 | - | 1074 | WP_000810253.1 | acyltransferase family protein | - |
| N6H17_RS06310 (1284465) | 1284465..1285664 | + | 1200 | WP_001422004.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| N6H17_RS06315 (1285657) | 1285657..1286358 | + | 702 | WP_001033694.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N6H17_RS06320 (1286358) | 1286358..1287602 | + | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| N6H17_RS06325 (1287631) | 1287631..1288542 | + | 912 | WP_261629618.1 | N-acetylglucosamine kinase | - |
| N6H17_RS06330 (1288558) | 1288558..1289397 | + | 840 | WP_000952737.1 | NAD-dependent protein deacylase | - |
| N6H17_RS06335 (1289517) | 1289517..1290305 | - | 789 | WP_000713462.1 | TPM domain-containing protein | - |
| N6H17_RS06340 (1290302) | 1290302..1290763 | - | 462 | WP_000076374.1 | DUF3592 domain-containing protein | - |
| N6H17_RS06345 (1290821) | 1290821..1291867 | - | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| N6H17_RS06350 (1291864) | 1291864..1292658 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| N6H17_RS06355 (1292825) | 1292825..1293943 | - | 1119 | WP_000074972.1 | hypothetical protein ; Integrase | Integrase |
| N6H17_RS06360 (1293912) | 1293912..1294181 | - | 270 | WP_000003742.1 | excisionase | - |
| N6H17_RS06365 (1294243) | 1294243..1296714 | - | 2472 | WP_261629619.1 | exonuclease | - |
| N6H17_RS06370 (1296808) | 1296808..1296999 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| N6H17_RS06375 (1296996) | 1296996..1297184 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| N6H17_RS06380 (1297753) | 1297753..1297971 | - | 219 | WP_001171969.1 | protein YdfC | - |
| N6H17_RS06385 (1298001) | 1298001..1298129 | - | 129 | WP_000344935.1 | protein YdfB | - |
| N6H17_RS06390 (1298131) | 1298131..1298286 | - | 156 | WP_032240568.1 | DUF1391 family protein | - |
| N6H17_RS06395 (1298562) | 1298562..1298849 | - | 288 | WP_000936798.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N6H17_RS06400 (1298849) | 1298849..1299040 | - | 192 | WP_000100899.1 | hypothetical protein | Antitoxin Detail |
| N6H17_RS06405 (1299068) | 1299068..1299469 | - | 402 | WP_001329851.1 | helix-turn-helix domain-containing protein | - |
| N6H17_RS06410 (1299579) | 1299579..1299851 | + | 273 | WP_000887447.1 | YdaS family helix-turn-helix protein | - |
| N6H17_RS06415 (1299835) | 1299835..1300260 | + | 426 | WP_032207470.1 | toxin YdaT family protein | - |
| N6H17_RS06420 (1300281) | 1300281..1301246 | + | 966 | WP_001422090.1 | hypothetical protein | - |
| N6H17_RS06425 (1301253) | 1301253..1301999 | + | 747 | WP_001409081.1 | ATP-binding protein | - |
| N6H17_RS06430 (1302021) | 1302021..1302791 | + | 771 | WP_196611302.1 | DUF1627 domain-containing protein | - |
| N6H17_RS06435 (1302807) | 1302807..1303199 | + | 393 | WP_054192692.1 | DUF977 family protein | - |
| N6H17_RS06440 (1303196) | 1303196..1303492 | + | 297 | WP_001266130.1 | DUF4406 domain-containing protein | - |
| N6H17_RS06445 (1303489) | 1303489..1303950 | + | 462 | WP_001209473.1 | ead/Ea22-like family protein | - |
| N6H17_RS06450 (1303928) | 1303928..1304284 | + | 357 | WP_000403785.1 | hypothetical protein | - |
| N6H17_RS06455 (1304380) | 1304380..1304805 | + | 426 | WP_000137946.1 | hypothetical protein | - |
| N6H17_RS06460 (1304807) | 1304807..1304985 | + | 179 | Protein_1260 | hypothetical protein | - |
| N6H17_RS06465 (1305319) | 1305319..1305663 | + | 345 | WP_032331585.1 | hypothetical protein | - |
| N6H17_RS06470 (1305955) | 1305955..1306110 | + | 156 | WP_000813256.1 | type I toxin-antitoxin system toxin HokD | - |
| N6H17_RS06475 (1306278) | 1306278..1306556 | + | 279 | WP_062883712.1 | hypothetical protein | - |
| N6H17_RS06480 (1306558) | 1306558..1307607 | + | 1050 | WP_032331586.1 | DUF968 domain-containing protein | - |
| N6H17_RS06485 (1307621) | 1307621..1307983 | + | 363 | WP_032331587.1 | RusA family crossover junction endodeoxyribonuclease | - |
| N6H17_RS06490 (1307976) | 1307976..1308665 | + | 690 | WP_024243668.1 | bacteriophage antitermination protein Q | - |
| N6H17_RS06495 (1308877) | 1308877..1309074 | + | 198 | WP_000917768.1 | hypothetical protein | - |
| N6H17_RS06500 (1309226) | 1309226..1310284 | + | 1059 | WP_261629620.1 | site-specific DNA-methyltransferase | - |
| N6H17_RS06520 (1310697) | 1310697..1310816 | - | 120 | Protein_1269 | hypothetical protein | - |
| N6H17_RS06525 (1311080) | 1311080..1313014 | + | 1935 | WP_261629598.1 | SASA family carbohydrate esterase | - |
| N6H17_RS06530 (1313163) | 1313163..1313345 | + | 183 | WP_024243671.1 | DUF1378 family protein | - |
| N6H17_RS06535 (1313383) | 1313383..1313652 | + | 270 | WP_047082705.1 | DUF826 domain-containing protein | - |
| N6H17_RS06540 (1313728) | 1313728..1313943 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| N6H17_RS06545 (1313948) | 1313948..1314292 | + | 345 | WP_000731183.1 | YdfR family protein | - |
| N6H17_RS06550 (1314258) | 1314258..1314530 | - | 273 | WP_000369850.1 | hypothetical protein | - |
| N6H17_RS06555 (1314636) | 1314636..1315169 | + | 534 | WP_112028778.1 | lysozyme | - |
| N6H17_RS06560 (1315325) | 1315325..1315507 | + | 183 | WP_071343009.1 | hypothetical protein | - |
| N6H17_RS06565 (1315520) | 1315520..1315651 | + | 132 | WP_001441792.1 | hypothetical protein | - |
| N6H17_RS06570 (1315879) | 1315879..1316064 | + | 186 | WP_001208683.1 | Rz1 family lipoprotein | - |
| N6H17_RS06575 (1316150) | 1316150..1316374 | + | 225 | WP_000735655.1 | hypothetical protein | - |
| N6H17_RS06580 (1316731) | 1316731..1316868 | + | 138 | WP_000523825.1 | hypothetical protein | - |
| N6H17_RS06585 (1317010) | 1317010..1317195 | - | 186 | WP_001371679.1 | YlcI/YnfO family protein | - |
| N6H17_RS06590 (1317582) | 1317582..1318130 | + | 549 | WP_001102155.1 | terminase small subunit | - |
| N6H17_RS06595 (1318102) | 1318102..1320030 | + | 1929 | WP_261629599.1 | phage terminase large subunit family protein | - |
| N6H17_RS06600 (1320014) | 1320014..1320220 | + | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| N6H17_RS06605 (1320217) | 1320217..1321809 | + | 1593 | WP_097726009.1 | phage portal protein | - |
| N6H17_RS06610 (1321799) | 1321799..1323304 | + | 1506 | WP_261629600.1 | S49 family peptidase | - |
| N6H17_RS06615 (1323341) | 1323341..1323688 | + | 348 | WP_062855759.1 | head decoration protein | - |
| N6H17_RS06620 (1323746) | 1323746..1324774 | + | 1029 | WP_194890193.1 | major capsid protein | - |
| N6H17_RS06625 (1324826) | 1324826..1325209 | + | 384 | WP_077167936.1 | DNA-packaging protein FI | - |
| N6H17_RS06630 (1325202) | 1325202..1325555 | + | 354 | WP_077167937.1 | head-tail joining protein | - |
| N6H17_RS06635 (1325570) | 1325570..1326103 | + | 534 | WP_077167938.1 | phage tail protein | - |
| N6H17_RS06640 (1326100) | 1326100..1326495 | + | 396 | WP_077167939.1 | phage minor tail U family protein | - |
| N6H17_RS06645 (1326503) | 1326503..1327255 | + | 753 | WP_077167940.1 | phage tail protein | - |
| N6H17_RS06650 (1327269) | 1327269..1327700 | + | 432 | WP_021499118.1 | phage minor tail protein G | - |
| N6H17_RS06655 (1327727) | 1327727..1328140 | + | 414 | WP_024217705.1 | phage tail assembly protein T | - |
| N6H17_RS06660 (1328121) | 1328121..1330631 | + | 2511 | WP_261629621.1 | phage tail tape measure protein | - |
| N6H17_RS06665 (1330628) | 1330628..1330957 | + | 330 | WP_033801250.1 | phage tail protein | - |
| N6H17_RS06670 (1330957) | 1330957..1331655 | + | 699 | WP_261629602.1 | phage minor tail protein L | - |
| N6H17_RS06675 (1331666) | 1331666..1332409 | + | 744 | WP_112033233.1 | C40 family peptidase | - |
| N6H17_RS06680 (1332406) | 1332406..1332951 | + | 546 | WP_176258444.1 | tail assembly protein | - |
| N6H17_RS06685 (1333189) | 1333189..1333311 | + | 123 | WP_112033232.1 | homoserine acetyltransferase | - |
| N6H17_RS06690 (1333426) | 1333426..1333944 | + | 519 | WP_224433092.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| N6H17_RS06695 (1334106) | 1334106..1337492 | + | 3387 | WP_261629622.1 | host specificity protein J | - |
| N6H17_RS06700 (1337559) | 1337559..1338158 | + | 600 | WP_219380991.1 | hypothetical protein | VF |
| N6H17_RS06705 (1338224) | 1338224..1338346 | + | 123 | WP_261629623.1 | prophage tail fiber N-terminal domain-containing protein | - |
| N6H17_RS06710 (1338346) | 1338346..1339023 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| N6H17_RS06715 (1339023) | 1339023..1339370 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N6H17_RS06720 (1339390) | 1339390..1340961 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N6H17_RS06725 (1340964) | 1340964..1341815 | + | 852 | Protein_1310 | ISNCY family transposase KIS | Transposase |
| N6H17_RS06730 (1342091) | 1342091..1342699 | + | 609 | WP_047082641.1 | DUF4376 domain-containing protein | - |
| N6H17_RS06735 (1342842) | 1342842..1343172 | - | 331 | Protein_1312 | YkgJ family cysteine cluster protein | - |
| N6H17_RS06740 (1343338) | 1343338..1344201 | - | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| N6H17_RS06745 (1344185) | 1344185..1345321 | - | 1137 | WP_000531594.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N6H17_RS06750 (1345571) | 1345571..1346797 | + | 1227 | WP_000359434.1 | peptidase T | - |
| N6H17_RS06755 (1346846) | 1346846..1347967 | - | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| N6H17_RS06760 (1348043) | 1348043..1349503 | - | 1461 | WP_061349348.1 | two-component system sensor histidine kinase PhoQ | - |
| N6H17_RS06765 (1349503) | 1349503..1350174 | - | 672 | WP_001265471.1 | two-component system response regulator PhoP | - |
| N6H17_RS06770 (1350343) | 1350343..1351713 | - | 1371 | WP_000423742.1 | adenylosuccinate lyase | - |
| N6H17_RS06775 (1351717) | 1351717..1352358 | - | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|