MGE detailed information
MGE type: Prophage MGE length: 33584 bp
Accession: NZ_CP104788 Location: 1755317..1788900 Organism: Escherichia coli strain SHP24 Replicon: chromosome
Accession: NZ_CP104788 Location: 1755317..1788900 Organism: Escherichia coli strain SHP24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6H17_RS08665 (1750332) | 1750332..1750766 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| N6H17_RS08670 (1750786) | 1750786..1751169 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| N6H17_RS08675 (1751201) | 1751201..1751419 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| N6H17_RS08680 (1751450) | 1751450..1752349 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| N6H17_RS08685 (1752544) | 1752544..1753731 | + | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| N6H17_RS08690 (1753858) | 1753858..1753953 | + | 96 | WP_000901367.1 | protein MgtS | - |
| N6H17_RS08695 (1753953) | 1753953..1754057 | + | 105 | WP_211180496.1 | protein MgtT | - |
| N6H17_RS08700 (1754172) | 1754172..1755062 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| N6H17_RS08705 (1755317) | 1755317..1755709 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| N6H17_RS08710 (1755985) | 1755985..1756503 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| N6H17_RS08715 (1756547) | 1756547..1758592 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| N6H17_RS08720 (1758729) | 1758729..1759475 | + | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| N6H17_RS08725 (1759564) | 1759564..1760250 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| N6H17_RS08730 (1760427) | 1760427..1760630 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| N6H17_RS08735 (1760665) | 1760665..1762125 | - | 1461 | WP_069985279.1 | mannitol dehydrogenase family protein | - |
| N6H17_RS08740 (1762214) | 1762214..1763497 | - | 1284 | Protein_1707 | MHS family MFS transporter YdfJ | - |
| N6H17_RS08745 (1764101) | 1764101..1764214 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| N6H17_RS08750 (1764283) | 1764283..1764516 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| N6H17_RS08755 (1764833) | 1764833..1765423 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| N6H17_RS08760 (1765521) | 1765521..1766096 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| N6H17_RS08765 (1766096) | 1766096..1766308 | - | 213 | Protein_1712 | hypothetical protein | - |
| N6H17_RS08770 (1766395) | 1766395..1766697 | - | 303 | Protein_1713 | hypothetical protein | - |
| N6H17_RS08775 (1766655) | 1766655..1767200 | - | 546 | WP_000453589.1 | DNA-packaging protein | - |
| N6H17_RS08780 (1767589) | 1767589..1767822 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| N6H17_RS08785 (1767880) | 1767880..1768290 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| N6H17_RS08790 (1768442) | 1768442..1768615 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| N6H17_RS08795 (1768787) | 1768787..1768942 | - | 156 | WP_001309517.1 | protein YnfN | - |
| N6H17_RS08800 (1769022) | 1769022..1769087 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| N6H17_RS08805 (1769090) | 1769090..1769278 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| N6H17_RS08810 (1769289) | 1769289..1769501 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| N6H17_RS08815 (1769864) | 1769864..1770361 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| N6H17_RS08820 (1770358) | 1770358..1770891 | - | 534 | WP_001092971.1 | lysozyme | - |
| N6H17_RS08825 (1770888) | 1770888..1771199 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| N6H17_RS08830 (1771204) | 1771204..1771419 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| N6H17_RS08835 (1771639) | 1771639..1771809 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| N6H17_RS08840 (1772173) | 1772173..1772388 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| N6H17_RS08845 (1772689) | 1772689..1772901 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| N6H17_RS08850 (1772956) | 1772956..1773045 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| N6H17_RS08855 (1773323) | 1773323..1774075 | - | 753 | WP_001047135.1 | antitermination protein | - |
| N6H17_RS08860 (1774089) | 1774089..1775138 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| N6H17_RS08865 (1775140) | 1775140..1775418 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| N6H17_RS08870 (1775485) | 1775485..1775736 | - | 252 | WP_000980994.1 | protein Rem | - |
| N6H17_RS08875 (1775953) | 1775953..1776108 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| N6H17_RS08880 (1776180) | 1776180..1776467 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| N6H17_RS08885 (1776467) | 1776467..1776706 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| N6H17_RS08890 (1776731) | 1776731..1777036 | + | 306 | WP_001326990.1 | protein YdfV | - |
| N6H17_RS08895 (1777239) | 1777239..1777571 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| N6H17_RS08900 (1778008) | 1778008..1778157 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| N6H17_RS08905 (1778278) | 1778278..1779300 | - | 1023 | Protein_1740 | ISNCY family transposase ISCARN112 | Transposase |
| N6H17_RS08910 (1780090) | 1780090..1780377 | - | 288 | Protein_1741 | hypothetical protein | - |
| N6H17_RS08915 (1780855) | 1780855..1781344 | - | 490 | Protein_1742 | class I SAM-dependent methyltransferase | - |
| N6H17_RS08920 (1781341) | 1781341..1781592 | - | 252 | Protein_1743 | DUF977 family protein | - |
| N6H17_RS08925 (1781582) | 1781582..1781962 | + | 381 | Protein_1744 | hypothetical protein | - |
| N6H17_RS08930 (1782005) | 1782005..1782901 | - | 897 | Protein_1745 | IS3 family transposase ISSd1 | Transposase |
| N6H17_RS08935 (1782908) | 1782908..1784059 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| N6H17_RS08940 (1784056) | 1784056..1784142 | - | 87 | Protein_1747 | IS3 family transposase ISSfl10 | Transposase |
| N6H17_RS08945 (1784124) | 1784124..1784384 | - | 261 | Protein_1748 | IS3 family transposase ISSfl10 | Transposase |
| N6H17_RS08950 (1784447) | 1784447..1786054 | + | 1608 | Protein_1749 | 3'-5' exoribonuclease | - |
| N6H17_RS08955 (1786127) | 1786127..1786378 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| N6H17_RS08960 (1786413) | 1786413..1787693 | + | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| N6H17_RS08965 (1787881) | 1787881..1788900 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| N6H17_RS08970 (1788912) | 1788912..1790126 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| N6H17_RS08975 (1790332) | 1790332..1790658 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| N6H17_RS08980 (1790793) | 1790793..1791134 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| N6H17_RS08985 (1791169) | 1791169..1791729 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| N6H17_RS08990 (1791732) | 1791732..1792442 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| N6H17_RS08995 (1792550) | 1792550..1792855 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|