MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99354 bp
Accession: NZ_CP104791 Location: 1..99354 Organism: Escherichia coli strain SHP24 Replicon: plasmid pHNSHP24-3
Accession: NZ_CP104791 Location: 1..99354 Organism: Escherichia coli strain SHP24 Replicon: plasmid pHNSHP24-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6H17_RS26175 (N6H17_26185) | 338..811 | - | 474 | WP_074164809.1 | phage tail protein | - |
| N6H17_RS26180 (N6H17_26190) | 852..1325 | - | 474 | WP_226454165.1 | phage tail protein | - |
| N6H17_RS26185 (N6H17_26195) | 1366..1824 | - | 459 | WP_072254261.1 | phage tail protein | - |
| N6H17_RS26190 (N6H17_26200) | 1914..2486 | + | 573 | WP_001165547.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| N6H17_RS26195 (N6H17_26205) | 2618..2746 | - | 129 | Protein_5 | DNA-invertase | - |
| N6H17_RS26200 (N6H17_26210) | 2946..3185 | + | 240 | WP_072258887.1 | phage holin family protein | - |
| N6H17_RS26205 (N6H17_26215) | 3260..3589 | + | 330 | WP_000887652.1 | phage holin family protein | - |
| N6H17_RS26210 (N6H17_26220) | 3586..4029 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| N6H17_RS26215 (N6H17_26225) | 4016..4618 | + | 603 | WP_001345482.1 | hypothetical protein | - |
| N6H17_RS26220 (N6H17_26230) | 4620..6539 | + | 1920 | WP_106108218.1 | hypothetical protein | - |
| N6H17_RS26225 (N6H17_26235) | 6536..6901 | + | 366 | WP_000175490.1 | hypothetical protein | - |
| N6H17_RS26230 (N6H17_26240) | 6914..9901 | + | 2988 | WP_249827768.1 | hypothetical protein | - |
| N6H17_RS26235 (N6H17_26245) | 9891..10199 | + | 309 | WP_001165936.1 | hypothetical protein | - |
| N6H17_RS26240 (N6H17_26250) | 10231..11325 | - | 1095 | WP_052957709.1 | hypothetical protein | - |
| N6H17_RS26245 (N6H17_26255) | 11318..12106 | - | 789 | WP_023351931.1 | hypothetical protein | - |
| N6H17_RS26250 (N6H17_26260) | 12311..13285 | - | 975 | WP_012478345.1 | IS30 family transposase ISApl1 | Transposase |
| N6H17_RS26255 (N6H17_26265) | 13375..14097 | - | 723 | WP_039003037.1 | PAP2 family protein | - |
| N6H17_RS26260 (N6H17_26270) | 14169..15794 | - | 1626 | WP_049589868.1 | hypothetical protein | VF |
| N6H17_RS26265 (N6H17_26275) | 15990..16964 | - | 975 | WP_012478345.1 | IS30 family transposase ISApl1 | Transposase |
| N6H17_RS26270 (N6H17_26280) | 17060..17548 | - | 489 | WP_023352831.1 | single-stranded DNA-binding protein | - |
| N6H17_RS26275 (N6H17_26285) | 17717..18274 | + | 558 | WP_001345478.1 | lysozyme | - |
| N6H17_RS26280 (N6H17_26290) | 18654..19868 | + | 1215 | WP_094320631.1 | IS200-IS605 family transposase IS609 | Transposase |
| N6H17_RS26285 (N6H17_26295) | 19902..20921 | - | 1020 | WP_024220494.1 | head processing protein | - |
| N6H17_RS26290 (N6H17_26300) | 20914..22623 | - | 1710 | WP_039022882.1 | hypothetical protein | - |
| N6H17_RS26295 (N6H17_26305) | 22700..29467 | + | 6768 | WP_249827770.1 | N-6 DNA methylase | - |
| N6H17_RS26300 (N6H17_26310) | 29501..29941 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| N6H17_RS26305 (N6H17_26315) | 29938..30186 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| N6H17_RS26310 (N6H17_26320) | 30224..31345 | - | 1122 | WP_001749390.1 | RelA/SpoT domain-containing protein | - |
| N6H17_RS26315 (N6H17_26325) | 31458..32099 | - | 642 | WP_024139118.1 | hypothetical protein | - |
| N6H17_RS26320 (N6H17_26330) | 32288..32848 | - | 561 | WP_001568010.1 | Ref family protein | - |
| N6H17_RS26325 (N6H17_26335) | 33095..33406 | - | 312 | WP_001749391.1 | hypothetical protein | - |
| N6H17_RS26330 (N6H17_26340) | 33457..34488 | - | 1032 | WP_085326055.1 | site-specific integrase | - |
| N6H17_RS26335 (N6H17_26345) | 34496..34717 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| N6H17_RS26340 (N6H17_26350) | 35322..35531 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| N6H17_RS26345 (N6H17_26355) | 35642..36493 | + | 852 | WP_000611666.1 | phage repressor protein C1 | - |
| N6H17_RS26350 (N6H17_26360) | 36526..37638 | - | 1113 | WP_096321053.1 | phage antirepressor KilAC domain-containing protein | - |
| N6H17_RS26355 (N6H17_26365) | 37635..37856 | - | 222 | WP_112924364.1 | host cell division inhibitor Icd-like protein | - |
| N6H17_RS26360 (N6H17_26370) | 37875..37994 | - | 120 | WP_071594056.1 | ash family protein | - |
| N6H17_RS26365 (N6H17_26375) | 38216..39700 | - | 1485 | WP_096321054.1 | terminase | - |
| N6H17_RS26370 (N6H17_26380) | 39700..40893 | - | 1194 | WP_096321055.1 | terminase | - |
| N6H17_RS26375 (N6H17_26385) | 40979..41431 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| N6H17_RS26380 (N6H17_26390) | 41520..42563 | - | 1044 | WP_009446825.1 | DUF968 domain-containing protein | - |
| N6H17_RS26385 (N6H17_26395) | 42591..42770 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| N6H17_RS26390 (N6H17_26400) | 42775..43155 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N6H17_RS26395 (N6H17_26405) | 43155..43376 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N6H17_RS26400 (N6H17_26410) | 43559..45115 | + | 1557 | WP_112917413.1 | type I restriction-modification system subunit M | - |
| N6H17_RS26405 (N6H17_26415) | 45112..46317 | + | 1206 | WP_001293319.1 | restriction endonuclease subunit S | - |
| N6H17_RS26410 (N6H17_26420) | 46439..49555 | + | 3117 | WP_247162812.1 | HsdR family type I site-specific deoxyribonuclease | - |
| N6H17_RS26415 (N6H17_26425) | 49820..50326 | - | 507 | WP_042032522.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| N6H17_RS26420 (N6H17_26430) | 50399..51661 | - | 1263 | WP_029401421.1 | hypothetical protein | - |
| N6H17_RS26425 (N6H17_26435) | 51963..52664 | - | 702 | WP_000684869.1 | hypothetical protein | - |
| N6H17_RS26430 (N6H17_26440) | 52661..53338 | - | 678 | WP_024262884.1 | metallophosphoesterase | - |
| N6H17_RS26435 (N6H17_26445) | 53335..53961 | - | 627 | WP_032272676.1 | hypothetical protein | - |
| N6H17_RS26440 (N6H17_26450) | 54463..54618 | - | 156 | WP_000095380.1 | hypothetical protein | - |
| N6H17_RS26445 (N6H17_26455) | 54685..55263 | - | 579 | WP_000943613.1 | VRR-NUC domain-containing protein | - |
| N6H17_RS26450 (N6H17_26460) | 55266..55511 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| N6H17_RS26455 (N6H17_26465) | 55658..56035 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| N6H17_RS26460 (N6H17_26470) | 56045..57262 | + | 1218 | WP_001141901.1 | hypothetical protein | - |
| N6H17_RS26465 (N6H17_26475) | 57266..57994 | + | 729 | WP_032272678.1 | hypothetical protein | - |
| N6H17_RS26470 (N6H17_26480) | 57981..58766 | + | 786 | WP_015974270.1 | hypothetical protein | - |
| N6H17_RS26475 (N6H17_26485) | 58768..59784 | + | 1017 | WP_015974269.1 | hypothetical protein | - |
| N6H17_RS26480 (N6H17_26490) | 59777..60409 | + | 633 | WP_000535202.1 | baseplate protein | - |
| N6H17_RS26485 (N6H17_26495) | 60456..61454 | - | 999 | WP_015974268.1 | hypothetical protein | - |
| N6H17_RS26490 (N6H17_26500) | 61454..62818 | - | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| N6H17_RS26500 (N6H17_26510) | 63291..63455 | - | 165 | WP_000234831.1 | DUF3927 family protein | - |
| N6H17_RS26505 (N6H17_26515) | 63455..63880 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| N6H17_RS26520 (N6H17_26530) | 65438..67702 | - | 2265 | WP_086722066.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| N6H17_RS26525 (N6H17_26535) | 67699..68604 | - | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| N6H17_RS26530 (N6H17_26540) | 68597..68881 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| N6H17_RS26535 (N6H17_26545) | 69344..70132 | + | 789 | WP_249827774.1 | hypothetical protein | - |
| N6H17_RS26540 (N6H17_26550) | 70172..70594 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| N6H17_RS26545 (N6H17_26555) | 70629..70760 | + | 132 | WP_001113883.1 | hypothetical protein | - |
| N6H17_RS26550 (N6H17_26560) | 70772..71164 | + | 393 | WP_033553806.1 | hypothetical protein | - |
| N6H17_RS26555 (N6H17_26565) | 71499..72383 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| N6H17_RS26560 (N6H17_26570) | 72676..73347 | + | 672 | WP_249827775.1 | GIY-YIG nuclease family protein | - |
| N6H17_RS26565 (N6H17_26575) | 73654..74850 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| N6H17_RS26570 (N6H17_26580) | 74867..75868 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| N6H17_RS26575 (N6H17_26585) | 76094..77800 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| N6H17_RS26580 (N6H17_26590) | 77861..79450 | + | 1590 | WP_000085145.1 | hypothetical protein | - |
| N6H17_RS26585 (N6H17_26595) | 79460..80275 | + | 816 | WP_000041756.1 | hypothetical protein | - |
| N6H17_RS26590 (N6H17_26600) | 80428..80892 | + | 465 | WP_001361637.1 | hypothetical protein | - |
| N6H17_RS26595 (N6H17_26605) | 80904..81413 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| N6H17_RS26600 (N6H17_26610) | 81530..81685 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| N6H17_RS26605 (N6H17_26615) | 81867..82112 | - | 246 | WP_001369095.1 | hypothetical protein | - |
| N6H17_RS26610 (N6H17_26620) | 82163..83008 | - | 846 | WP_001667233.1 | helix-turn-helix domain-containing protein | - |
| N6H17_RS26615 (N6H17_26625) | 83038..83838 | - | 801 | WP_001187871.1 | phage antirepressor KilAC domain-containing protein | - |
| N6H17_RS26620 (N6H17_26630) | 84003..85046 | - | 1044 | WP_015974252.1 | phage antirepressor KilAC domain-containing protein | - |
| N6H17_RS26625 (N6H17_26635) | 85043..85264 | - | 222 | WP_015974251.1 | host cell division inhibitor Icd-like protein | - |
| N6H17_RS26630 (N6H17_26640) | 85844..86161 | + | 318 | WP_000908460.1 | hypothetical protein | - |
| N6H17_RS26635 (N6H17_26645) | 86169..86948 | + | 780 | WP_106108222.1 | hypothetical protein | - |
| N6H17_RS26640 (N6H17_26650) | 87158..87724 | + | 567 | WP_000188919.1 | hypothetical protein | - |
| N6H17_RS26645 (N6H17_26655) | 87735..88346 | + | 612 | WP_000523978.1 | hypothetical protein | - |
| N6H17_RS26650 (N6H17_26660) | 88361..89242 | + | 882 | WP_000926351.1 | hypothetical protein | - |
| N6H17_RS26655 (N6H17_26665) | 89324..92746 | + | 3423 | WP_063073229.1 | lytic transglycosylase domain-containing protein | - |
| N6H17_RS26660 (N6H17_26670) | 92746..93102 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| N6H17_RS26665 (N6H17_26675) | 93099..94532 | + | 1434 | WP_000047920.1 | bleomycin hydrolase | - |
| N6H17_RS26670 (N6H17_26680) | 94532..95368 | + | 837 | WP_001189832.1 | hypothetical protein | - |
| N6H17_RS26675 (N6H17_26685) | 95447..95881 | + | 435 | WP_001286325.1 | hypothetical protein | - |
| N6H17_RS26680 (N6H17_26690) | 95893..97572 | + | 1680 | WP_261629696.1 | tail fiber protein | - |
| N6H17_RS26685 (N6H17_26695) | 97572..98183 | + | 612 | WP_000367945.1 | tail fiber assembly protein | - |
| N6H17_RS26690 (N6H17_26700) | 98189..98656 | - | 468 | WP_001376653.1 | phage tail protein | - |
| N6H17_RS26695 (N6H17_26705) | 98697..99134 | - | 438 | WP_072198933.1 | phage tail protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|