NZ_CP1047901..186621

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 186621 bp
Accession: NZ_CP104790        Location: 1..186621         Organism: Escherichia coli strain SHP24       Replicon: plasmid pHNSHP24-2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N6H17_RS25175 (1) 1..858 + 858 WP_195686735.1 incFII family plasmid replication initiator RepA -
N6H17_RS25180 (1777) 1777..2061 + 285 WP_072141942.1 DUF1778 domain-containing protein Antitoxin Detail
N6H17_RS25185 (2049) 2049..2534 + 486 WP_000501972.1 GNAT family N-acetyltransferase Toxin Detail
N6H17_RS25190 (3154) 3154..4256 - 1103 Protein_3 IS91 family transposase ISEc37 Transposase
N6H17_RS25195 (4256) 4256..4621 - 366 WP_032233136.1 hypothetical protein -
N6H17_RS25200 (4893) 4893..5408 - 516 WP_000419088.1 YopT-type cysteine protease domain-containing protein -
N6H17_RS25205 (5570) 5570..6607 + 1038 Protein_6 IS21 family transposase IS21 Transposase
N6H17_RS25210 (6607) 6607..7404 + 798 WP_053295843.1 IS21 family transposase IS21 Transposase
N6H17_RS25215 (7484) 7484..7591 + 108 Protein_8 ATP-binding protein -
N6H17_RS25220 (7758) 7758..8117 + 360 WP_149005514.1 hypothetical protein -
N6H17_RS25225 (8496) 8496..8972 + 477 WP_000072546.1 hypothetical protein VF
N6H17_RS25230 (8975) 8975..10453 + 1479 WP_000150696.1 hypothetical protein VF
N6H17_RS25235 (10463) 10463..10984 + 522 WP_000509439.1 hypothetical protein -
N6H17_RS25240 (10993) 10993..11415 + 423 WP_000555553.1 hypothetical protein -
N6H17_RS25245 (11408) 11408..13210 + 1803 WP_261629689.1 type VI secretion system baseplate subunit TssF -
N6H17_RS25250 (13201) 13201..14133 + 933 WP_000268398.1 type VI secretion system baseplate subunit TssG -
N6H17_RS25255 (14146) 14146..16185 + 2040 WP_001488710.1 type VI secretion system tip protein TssI/VgrG -
N6H17_RS25260 (16196) 16196..16663 + 468 WP_000122967.1 hypothetical protein -
N6H17_RS25265 (16672) 16672..16971 + 300 WP_001353677.1 PAAR domain-containing protein -
N6H17_RS25270 (16975) 16975..18051 + 1077 WP_001031759.1 type VI secretion system protein TssA -
N6H17_RS25275 (18059) 18059..18610 + 552 WP_000216324.1 type VI secretion lipoprotein TssJ -
N6H17_RS25280 (18629) 18629..19993 + 1365 WP_001154670.1 type VI secretion system baseplate subunit TssK -
N6H17_RS25285 (20347) 20347..20964 + 618 WP_001488713.1 hypothetical protein VF
N6H17_RS25290 (20971) 20971..24375 + 3405 WP_261629690.1 type VI secretion system protein -
N6H17_RS25295 (24379) 24379..26907 + 2529 WP_261629691.1 Protein ClpV1 VF
N6H17_RS25300 (27609) 27609..28754 + 1146 WP_000358320.1 type VI secretion system ImpA family N-terminal domain-containing protein -
N6H17_RS25305 (29067) 29067..29441 + 375 WP_247183073.1 kinesin -
N6H17_RS25310 (29480) 29480..30043 + 564 WP_000271470.1 hypothetical protein -
N6H17_RS25315 (30469) 30469..30870 + 402 WP_000937097.1 hypothetical protein -
N6H17_RS25320 (31050) 31050..31640 + 591 WP_000819278.1 hypothetical protein VF
N6H17_RS25325 (32456) 32456..32998 - 543 Protein_30 IS21 family transposase ISSso4 Transposase
N6H17_RS25330 (33893) 33893..34399 + 507 WP_000348132.1 hypothetical protein -
N6H17_RS25335 (34703) 34703..35011 + 309 WP_053295854.1 hypothetical protein -
N6H17_RS25340 (35297) 35297..35893 + 597 WP_071528491.1 AvrPphF family type III effector -
N6H17_RS25345 (35949) 35949..36155 + 207 WP_053295855.1 hemolysin expression modulator Hha -
N6H17_RS25350 (36374) 36374..36739 + 366 WP_032233136.1 hypothetical protein -
N6H17_RS25355 (36739) 36739..37841 + 1103 Protein_36 IS91 family transposase ISEc37 Transposase
N6H17_RS25360 (38023) 38023..40947 + 2925 WP_261629695.1 Tn3 family transposase TnpA_ISAcsp1 Transposase
N6H17_RS25365 (40978) 40978..41122 + 145 Protein_38 type II toxin-antitoxin system toxin YacB -
N6H17_RS25370 (42021) 42021..46142 + 4122 WP_255800154.1 Serine protease pic autotransporter VF
N6H17_RS25375 (46301) 46301..46603 + 303 Protein_40 IS630 family transposase ISSpu2 Transposase
N6H17_RS25380 (46775) 46775..47315 + 541 Protein_41 IS110 family transposase IS1618 Transposase
N6H17_RS25385 (47652) 47652..48662 + 1011 WP_261629692.1 IS110 family transposase IS4321 Transposase
N6H17_RS25390 (48941) 48941..49093 + 153 Protein_43 ISNCY family transposase -
N6H17_RS25395 (49404) 49404..49700 - 297 WP_000412343.1 NadS family protein -
N6H17_RS25400 (49749) 49749..49910 - 162 Protein_45 type II toxin-antitoxin system RelE/ParE family toxin -
N6H17_RS25405 (49986) 49986..50243 + 258 Protein_46 IS3 family transposase IS911 Transposase
N6H17_RS25410 (50256) 50256..51407 - 1152 WP_001254876.1 IS30 family transposase IS30D Transposase
N6H17_RS25415 (51404) 51404..51484 - 81 Protein_48 hypothetical protein -
N6H17_RS25420 (51472) 51472..52377 + 906 Protein_49 IS3 family transposase ISLad1 Transposase
N6H17_RS25425 (52727) 52727..53893 + 1167 WP_000523852.1 plasmid-partitioning protein SopA -
N6H17_RS25430 (53893) 53893..54864 + 972 WP_000817026.1 ParB/RepB/Spo0J family plasmid partition protein -
N6H17_RS25435 (55377) 55377..55628 + 252 WP_001132891.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
N6H17_RS25440 (55625) 55625..55912 + 288 WP_000222773.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
N6H17_RS25445 (56048) 56048..56442 + 395 Protein_54 helix-turn-helix domain-containing protein -
N6H17_RS25450 (56631) 56631..57679 - 1049 Protein_55 IS91 family transposase ISEc37 Transposase
N6H17_RS25455 (57695) 57695..58368 - 674 Protein_56 transposase -
N6H17_RS25460 (58441) 58441..58839 + 399 Protein_57 conjugal transfer protein TraD -
N6H17_RS25465 (58848) 58848..59246 - 399 WP_096973166.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N6H17_RS25470 (59246) 59246..59473 - 228 WP_000450530.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
N6H17_RS25475 (59555) 59555..64744 + 5190 WP_261629693.1 Multifunctional conjugation protein TraI Relaxase
N6H17_RS25480 (64764) 64764..65510 + 747 WP_136826630.1 conjugal transfer pilus acetylase TraX -
N6H17_RS25485 (65569) 65569..66429 + 861 WP_000704512.1 Quorum-quenching protein AidA VF
N6H17_RS25490 (66532) 66532..67082 + 551 Protein_63 fertility inhibition protein FinO -
N6H17_RS25495 (67233) 67233..67436 + 204 WP_062883047.1 hypothetical protein -
N6H17_RS25500 (67842) 67842..68036 + 195 Protein_65 IS66 family transposase ISEc23 Transposase
N6H17_RS25505 (68087) 68087..69166 - 1080 Protein_66 IS66 family transposase ISEc23 Transposase
N6H17_RS25510 (69211) 69211..70423 - 1213 Protein_67 IS3 family transposase IS629 Transposase
N6H17_RS25515 (70469) 70469..70702 + 234 Protein_68 transposase -
N6H17_RS25520 (71019) 71019..71945 - 927 WP_000024632.1 LysR substrate-binding domain-containing protein -
N6H17_RS25525 (72068) 72068..73426 + 1359 WP_261629694.1 aromatic acid/H+ symport family MFS transporter -
N6H17_RS25530 (73438) 73438..74466 + 1029 WP_000132381.1 gentisate 1,2-dioxygenase -
N6H17_RS25535 (74482) 74482..75183 + 702 WP_000196047.1 fumarylacetoacetate hydrolase family protein -
N6H17_RS25540 (75192) 75192..75836 + 645 WP_000781199.1 maleylacetoacetate isomerase -
N6H17_RS25545 (75851) 75851..77044 + 1194 WP_000170150.1 3-hydroxybenzoate 6-monooxygenase -
N6H17_RS25550 (77295) 77295..77468 + 174 Protein_75 hypothetical protein -
N6H17_RS25555 (77666) 77666..78289 + 624 WP_250692861.1 hypothetical protein -
N6H17_RS25560 (80934) 80934..81665 + 732 Protein_77 IS3 family transposase ISEc48 Transposase
N6H17_RS25565 (82040) 82040..82609 + 570 WP_053295525.1 hypothetical protein -
N6H17_RS25570 (82675) 82675..83397 + 723 WP_247183147.1 Chaperone protein FocC VF
N6H17_RS25575 (83418) 83418..85907 + 2490 WP_000418197.1 Outer membrane usher protein FimD VF
N6H17_RS25580 (86273) 86273..87497 - 1225 Protein_81 IS3 family transposase IS629 Transposase
N6H17_RS25585 (87779) 87779..88144 + 366 WP_032233136.1 hypothetical protein -
N6H17_RS25590 (88144) 88144..89246 + 1103 Protein_83 IS91 family transposase ISEc37 Transposase
N6H17_RS25595 (89610) 89610..89789 + 180 Protein_84 IS66 family transposase -
N6H17_RS25600 (90121) 90121..93945 - 3825 WP_064759636.1 Serine protease SepA autotransporter VF
N6H17_RS25605 (94518) 94518..94958 - 441 WP_001290069.1 hypothetical protein -
N6H17_RS25610 (95028) 95028..95303 - 276 WP_000421255.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
N6H17_RS25615 (95303) 95303..95587 - 285 WP_001487904.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
N6H17_RS25620 (95872) 95872..96261 + 390 Protein_89 Tn3 family transposase TnpR_ISMpo10 Transposase
N6H17_RS25630 (97510) 97510..99059 - 1550 Protein_91 type IV secretion system DNA-binding domain-containing protein -
N6H17_RS25635 (99114) 99114..99791 + 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25640 (99791) 99791..100138 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25645 (100158) 100158..101729 + 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25650 (101937) 101937..102674 - 738 WP_261629674.1 hypothetical protein -
N6H17_RS25655 (102877) 102877..103608 - 732 WP_021521294.1 conjugal transfer complement resistance protein TraT -
N6H17_RS25660 (103622) 103622..104131 - 510 WP_196057475.1 conjugal transfer entry exclusion protein TraS -
N6H17_RS25665 (104128) 104128..106818 - 2691 WP_261629675.1 conjugal transfer protein TraG -
N6H17_RS25670 (106815) 106815..107726 - 912 Protein_99 conjugal transfer protein TraH -
N6H17_RS25675 (107779) 107779..108844 + 1066 Protein_100 IS3 family transposase IS629 Transposase
N6H17_RS25680 (108887) 108887..109057 + 171 Protein_101 IS3 family transposase ISKpn38 Transposase
N6H17_RS25685 (109257) 109257..110108 - 852 WP_261629676.1 SdiA-regulated domain-containing protein -
N6H17_RS25690 (110406) 110406..111439 - 1034 Protein_103 IS481 family transposase ISKpn28 Transposase
N6H17_RS25695 (111540) 111540..112115 + 576 Protein_104 Tn3 family transposase TnpA_TnEc1 Transposase
N6H17_RS25700 (112146) 112146..112412 - 267 Protein_105 ISKra4 family transposase ISEc51 Transposase
N6H17_RS25705 (112465) 112465..113013 - 549 WP_247183145.1 plasmid pRiA4b ORF-3 family protein -
N6H17_RS25710 (113173) 113173..113637 - 465 WP_261629677.1 AvrPphF family type III effector -
N6H17_RS25715 (113768) 113768..115339 - 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25720 (115359) 115359..115706 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25725 (115706) 115706..116383 - 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25730 (116519) 116519..117216 + 698 WP_103215986.1 IS1-like element IS1A family transposase -
N6H17_RS25735 (117456) 117456..117845 - 390 WP_001172746.1 cytochrome b562 -
N6H17_RS25740 (117889) 117889..120096 - 2208 WP_000592335.1 Catalase-peroxidase VF
N6H17_RS25745 (120491) 120491..121659 + 1169 WP_261629673.1 IS3 family transposase ISLad1 Transposase
N6H17_RS25750 (121667) 121667..123076 - 1410 Protein_115 IS21 family transposase ISEc10 Transposase
N6H17_RS25755 (123172) 123172..123492 + 321 Protein_116 IS21 family transposase IS21 Transposase
N6H17_RS25760 (123554) 123554..123726 + 173 Protein_117 recombinase family protein -
N6H17_RS25765 (123726) 123726..123959 - 234 Protein_118 IS91 family transposase ISSbo1 Transposase
N6H17_RS25770 (124227) 124227..125024 + 798 WP_000138483.1 AraC family transcriptional regulator -
N6H17_RS25775 (125183) 125183..125326 + 144 Protein_120 IS3 family transposase -
N6H17_RS25780 (125465) 125465..126072 + 608 Protein_121 IS481 family transposase ISKpn28 Transposase
N6H17_RS25790 (127545) 127545..127910 - 366 WP_032233136.1 hypothetical protein -
N6H17_RS25795 (128001) 128001..129174 + 1174 Protein_124 IS3 family transposase IS629 Transposase
N6H17_RS25800 (130576) 130576..131040 - 465 WP_052953869.1 hypothetical protein -
N6H17_RS25805 (131204) 131204..131821 - 618 WP_000725527.1 hypothetical protein -
N6H17_RS25810 (132467) 132467..132985 + 519 WP_024173856.1 hypothetical protein -
N6H17_RS25815 (133130) 133130..133318 + 189 WP_001488592.1 hypothetical protein -
N6H17_RS25820 (133358) 133358..133792 - 435 Protein_129 IS3 family transposase IS629 Transposase
N6H17_RS25825 (133990) 133990..134779 - 790 Protein_130 IS3 family transposase IS629 Transposase
N6H17_RS25830 (134872) 134872..135220 + 349 Protein_131 DNA-binding protein -
N6H17_RS25835 (135537) 135537..135773 + 237 WP_032257624.1 colicin V immunity protein -
N6H17_RS25840 (135751) 135751..136062 + 312 WP_032233004.1 colicin V -
N6H17_RS25845 (136232) 136232..138328 - 2097 WP_054088338.1 microcin H47 export transporter peptidase/ATP-binding subunit MchF -
N6H17_RS25850 (138321) 138321..139595 - 1275 WP_000489608.1 HlyD family secretion protein -
N6H17_RS25855 (140230) 140230..140883 + 654 WP_261629678.1 type II CAAX endopeptidase family protein -
N6H17_RS25860 (140976) 140976..141233 + 258 WP_000557618.1 type II toxin-antitoxin system antitoxin PemI -
N6H17_RS25865 (141166) 141166..141567 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
N6H17_RS25870 (141682) 141682..142077 - 396 WP_000445932.1 plasmid partitioning/stability family protein -
N6H17_RS25875 (142077) 142077..143036 - 960 WP_000921960.1 plasmid segregation protein ParM -
N6H17_RS25880 (143388) 143388..144290 + 903 WP_001488728.1 DUF1281 domain-containing protein -
N6H17_RS25885 (144287) 144287..144598 + 312 WP_011666457.1 hypothetical protein -
N6H17_RS25890 (144674) 144674..145357 + 684 WP_000086181.1 DNA methylase -
N6H17_RS25895 (145358) 145358..145579 + 222 WP_001104873.1 hypothetical protein -
N6H17_RS25900 (145509) 145509..146027 + 519 WP_228201029.1 DUF1380 family protein -
N6H17_RS25905 (146078) 146078..146854 + 777 WP_001488730.1 hypothetical protein -
N6H17_RS25910 (147270) 147270..147695 + 426 WP_001198904.1 antirestriction protein -
N6H17_RS25915 (147742) 147742..148164 + 423 WP_000271681.1 DUF1380 family protein -
N6H17_RS25920 (148161) 148161..148352 + 192 WP_001027498.1 hypothetical protein -
N6H17_RS25925 (148331) 148331..148801 - 471 WP_198587918.1 hypothetical protein -
N6H17_RS25930 (149314) 149314..149544 + 231 WP_000155844.1 hypothetical protein -
N6H17_RS25935 (149596) 149596..150957 + 1362 WP_000170716.1 DUF3560 domain-containing protein -
N6H17_RS25940 (151004) 151004..151255 + 252 Protein_153 class I SAM-dependent methyltransferase -
N6H17_RS25945 (151284) 151284..152855 - 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25950 (152875) 152875..153222 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25955 (153222) 153222..153899 - 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
N6H17_RS25960 (153954) 153954..154274 + 321 Protein_157 class I SAM-dependent methyltransferase -
N6H17_RS25965 (154255) 154255..154798 - 544 Protein_158 hypothetical protein -
N6H17_RS25970 (154758) 154758..155729 - 972 WP_000082157.1 IS110 family transposase ISSm3 Transposase
N6H17_RS25975 (155900) 155900..155980 - 81 Protein_160 hypothetical protein -
N6H17_RS25980 (156628) 156628..157599 - 972 WP_261629679.1 IS110 family transposase IS1663 Transposase
N6H17_RS25990 (159220) 159220..159747 + 528 WP_261629680.1 single-stranded DNA-binding protein -
N6H17_RS25995 (159805) 159805..160038 + 234 WP_000006010.1 DUF905 family protein -
N6H17_RS26000 (160103) 160103..162067 + 1965 WP_261629681.1 ParB/RepB/Spo0J family partition protein -
N6H17_RS26005 (162136) 162136..162570 + 435 WP_261629682.1 conjugation system SOS inhibitor PsiB -
N6H17_RS26010 (162567) 162567..163329 + 763 Protein_167 plasmid SOS inhibition protein A -
N6H17_RS26015 (163307) 163307..163486 - 180 WP_001309233.1 hypothetical protein -
- (163298) 163298..163522 + 225 NuclAT_0 - -
- (163298) 163298..163522 + 225 NuclAT_0 - -
- (163298) 163298..163522 + 225 NuclAT_0 - -
- (163298) 163298..163522 + 225 NuclAT_0 - -
N6H17_RS26020 (163508) 163508..163657 + 150 Protein_169 plasmid maintenance protein Mok -
N6H17_RS26025 (163608) 163608..163724 + 117 WP_001323520.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
N6H17_RS26030 (164043) 164043..164340 - 298 Protein_171 hypothetical protein -
N6H17_RS26035 (164641) 164641..164928 + 288 WP_000107526.1 hypothetical protein -
N6H17_RS26040 (165047) 165047..165868 + 822 WP_011666475.1 DUF932 domain-containing protein -
N6H17_RS26045 (166164) 166164..166766 - 603 WP_077539848.1 hypothetical protein VF
N6H17_RS26050 (167086) 167086..167469 + 384 WP_001151524.1 conjugal transfer relaxosome DNA-binding protein TraM -
N6H17_RS26055 (167656) 167656..168345 + 690 WP_261629683.1 conjugal transfer transcriptional regulator TraJ -
N6H17_RS26060 (168438) 168438..168839 + 402 WP_001369361.1 conjugal transfer relaxosome DNA-bindin protein TraY -
N6H17_RS26065 (168872) 168872..169237 + 366 WP_105454812.1 type IV conjugative transfer system pilin TraA -
N6H17_RS26070 (169252) 169252..169563 + 312 WP_073519963.1 type IV conjugative transfer system protein TraL -
N6H17_RS26075 (169585) 169585..170151 + 567 WP_261629684.1 type IV conjugative transfer system protein TraE -
N6H17_RS26080 (170138) 170138..170866 + 729 WP_261629685.1 type-F conjugative transfer system secretin TraK -
N6H17_RS26085 (170866) 170866..172320 + 1455 Protein_182 conjugal transfer protein TraB -
N6H17_RS26090 (172310) 172310..172915 + 606 WP_261629686.1 conjugal transfer pilus-stabilizing protein TraP -
N6H17_RS26100 (173604) 173604..173888 + 285 Protein_185 hypothetical protein -
N6H17_RS26105 (173939) 173939..176128 + 2190 WP_261629687.1 type IV conjugative transfer system coupling protein TraD -
N6H17_RS26110 (176137) 176137..176535 - 399 WP_000911313.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N6H17_RS26115 (176535) 176535..176762 - 228 WP_000450528.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
N6H17_RS26120 (176844) 176844..182033 + 5190 WP_261629688.1 Multifunctional conjugation protein TraI Relaxase
N6H17_RS26125 (182053) 182053..182799 + 747 WP_000205734.1 conjugal transfer pilus acetylase TraX -
N6H17_RS26130 (182854) 182854..183414 + 561 WP_000139340.1 fertility inhibition protein FinO -
N6H17_RS26135 (183546) 183546..183758 + 213 WP_195686733.1 hypothetical protein -
N6H17_RS26140 (184004) 184004..184465 + 462 WP_195686734.1 thermonuclease family protein -
N6H17_RS26145 (184511) 184511..184720 + 210 WP_001488746.1 hemolysin expression modulator Hha -
N6H17_RS26150 (184758) 184758..185348 + 591 WP_000766805.1 DUF2726 domain-containing protein -
- (185523) 185523..185581 - 59 NuclAT_1 - Antitoxin Detail
- (185523) 185523..185581 - 59 NuclAT_1 - Antitoxin Detail
- (185523) 185523..185581 - 59 NuclAT_1 - Antitoxin Detail
- (185523) 185523..185581 - 59 NuclAT_1 - Antitoxin Detail
N6H17_RS26155 (185627) 185627..185776 + 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
N6H17_RS26160 (186060) 186060..186308 + 249 WP_000083832.1 replication regulatory protein RepA -
N6H17_RS26165 (186423) 186423..186609 + 187 Protein_198 protein CopA/IncA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance