MGE detailed information
MGE type: IScluster/Tn MGE length: 12068 bp
Accession: NZ_CP104790 Location: 46301..58368 Organism: Escherichia coli strain SHP24 Replicon: plasmid pHNSHP24-2
Accession: NZ_CP104790 Location: 46301..58368 Organism: Escherichia coli strain SHP24 Replicon: plasmid pHNSHP24-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6H17_RS25370 (42021) | 42021..46142 | + | 4122 | WP_255800154.1 | S6 family peptidase | - |
| N6H17_RS25375 (46301) | 46301..46603 | + | 303 | Protein_40 | IS630 family transposase ISSpu2 | Transposase |
| N6H17_RS25380 (46775) | 46775..47315 | + | 541 | Protein_41 | IS110 family transposase IS1618 | Transposase |
| N6H17_RS25385 (47652) | 47652..48662 | + | 1011 | WP_261629692.1 | IS110 family transposase IS4321 | Transposase |
| N6H17_RS25390 (48941) | 48941..49093 | + | 153 | Protein_43 | ISNCY family transposase | - |
| N6H17_RS25395 (49404) | 49404..49700 | - | 297 | WP_000412343.1 | NadS family protein | - |
| N6H17_RS25400 (49749) | 49749..49910 | - | 162 | Protein_45 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N6H17_RS25405 (49986) | 49986..50243 | + | 258 | Protein_46 | IS3 family transposase IS911 | Transposase |
| N6H17_RS25410 (50256) | 50256..51407 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| N6H17_RS25415 (51404) | 51404..51484 | - | 81 | Protein_48 | hypothetical protein | - |
| N6H17_RS25420 (51472) | 51472..52377 | + | 906 | Protein_49 | IS3 family transposase ISLad1 | Transposase |
| N6H17_RS25425 (52727) | 52727..53893 | + | 1167 | WP_000523852.1 | plasmid-partitioning protein SopA | - |
| N6H17_RS25430 (53893) | 53893..54864 | + | 972 | WP_000817026.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N6H17_RS25435 (55377) | 55377..55628 | + | 252 | WP_001132891.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N6H17_RS25440 (55625) | 55625..55912 | + | 288 | WP_000222773.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N6H17_RS25445 (56048) | 56048..56442 | + | 395 | Protein_54 | helix-turn-helix domain-containing protein | - |
| N6H17_RS25450 (56631) | 56631..57679 | - | 1049 | Protein_55 | IS91 family transposase ISEc37 | Transposase |
| N6H17_RS25455 (57695) | 57695..58368 | - | 674 | Protein_56 | transposase | - |
| N6H17_RS25460 (58441) | 58441..58839 | + | 399 | Protein_57 | conjugal transfer protein TraD | - |
| N6H17_RS25465 (58848) | 58848..59246 | - | 399 | WP_096973166.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N6H17_RS25470 (59246) | 59246..59473 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|