Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   MKY04_RS07280 Genome accession   NZ_CP155468
Coordinates   1536683..1537747 (+) Length   354 a.a.
NCBI ID   WP_126293029.1    Uniprot ID   A0A431UW46
Organism   Lysinibacillus telephonicus strain FSL R5-0572     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1531683..1542747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY04_RS07255 (MKY04_07255) - 1531999..1532256 (+) 258 WP_126293024.1 DUF3243 domain-containing protein -
  MKY04_RS07260 (MKY04_07260) - 1532553..1533344 (+) 792 WP_126293025.1 DUF3388 domain-containing protein -
  MKY04_RS07265 (MKY04_07265) - 1533621..1534487 (+) 867 WP_346235572.1 RodZ domain-containing protein -
  MKY04_RS07270 (MKY04_07270) pgsA 1534536..1535114 (+) 579 WP_126293027.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKY04_RS07275 (MKY04_07275) cinA 1535128..1536384 (+) 1257 WP_126293028.1 competence/damage-inducible protein A Machinery gene
  MKY04_RS07280 (MKY04_07280) recA 1536683..1537747 (+) 1065 WP_126293029.1 recombinase RecA Machinery gene
  MKY04_RS07285 (MKY04_07285) rny 1538429..1539985 (+) 1557 WP_346235573.1 ribonuclease Y -
  MKY04_RS07290 (MKY04_07290) - 1540128..1540880 (+) 753 WP_346235574.1 CpsB/CapC family capsule biosynthesis tyrosine phosphatase -
  MKY04_RS07295 (MKY04_07295) - 1541241..1542470 (+) 1230 WP_126294774.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 354 a.a.        Molecular weight: 38306.50 Da        Isoelectric Point: 4.6805

>NTDB_id=996667 MKY04_RS07280 WP_126293029.1 1536683..1537747(+) (recA) [Lysinibacillus telephonicus strain FSL R5-0572]
MSDRKAALDMALKQIEKQFGKGSIMKLGEQSDRQISTSPSGSLALDAALGVGGYPRGRIIEIYGPESSGKTTVALHAIAE
IQANGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDS
HMGLQARLMSQALRKLSGIINKSNTLAIFINQVREKIGVMFGNPETTTGGRALKFYASIRLEVRRAEQIKQGTEMIGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIVDLGAELDIIQKSGSWYAYGDERIGQGRENAKQYLKANPAIRDEIANK
IRESYGIASSSYTIGAHDEEEEMDEELALLLDEE

Nucleotide


Download         Length: 1065 bp        

>NTDB_id=996667 MKY04_RS07280 WP_126293029.1 1536683..1537747(+) (recA) [Lysinibacillus telephonicus strain FSL R5-0572]
TTGAGCGATCGTAAAGCTGCCTTAGATATGGCATTAAAACAAATTGAAAAGCAATTCGGTAAAGGTTCTATTATGAAGCT
TGGTGAACAATCAGACCGCCAAATCTCAACATCACCTAGTGGTTCTTTGGCGCTTGATGCAGCACTTGGAGTAGGGGGCT
ATCCTCGCGGCCGTATTATTGAAATTTACGGTCCAGAATCATCTGGTAAAACGACTGTTGCCCTGCACGCAATTGCTGAA
ATTCAAGCAAATGGCGGACAAGCTGCGTTCATCGATGCAGAGCACGCATTAGATCCAGTGTACGCGCAAAAATTAGGTGT
TAATATTGATGAATTATTACTTTCTCAACCAGATACTGGTGAGCAAGCATTAGAAATAGCTGAAGCATTAGTACGTAGTG
GTGCGATTGATATTATCGTTATCGACTCAGTTGCTGCCCTAGTACCAAAAGCAGAAATTGAAGGTGAGATGGGTGACTCT
CATATGGGTCTGCAAGCTCGTTTAATGTCTCAAGCACTTCGTAAACTTTCTGGTATTATTAACAAATCAAACACATTGGC
TATCTTTATCAACCAAGTTCGTGAAAAAATTGGCGTTATGTTCGGCAACCCAGAAACAACTACTGGTGGACGTGCCCTTA
AATTTTATGCGTCAATTCGTCTTGAAGTTCGCCGTGCTGAACAAATTAAACAAGGTACAGAAATGATAGGGAACAAAACG
AAGATCAAAGTTGTAAAGAATAAAGTTGCTCCTCCATTCCGTACTGCAGAAGTAGATATTATGTATGGTGAAGGTATTTC
CAAAGAAGGAGAAATTGTTGACCTTGGTGCAGAGTTAGACATTATTCAAAAAAGCGGTTCATGGTATGCATATGGTGATG
AGCGCATAGGTCAAGGTCGTGAAAACGCAAAACAATACTTAAAAGCAAATCCAGCAATCCGCGATGAGATAGCTAACAAA
ATTCGTGAATCCTATGGAATTGCTTCGTCATCATATACAATTGGTGCACATGATGAAGAGGAAGAAATGGATGAAGAGTT
AGCATTATTATTAGACGAAGAATAG

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A431UW46

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

84.709

92.373

0.782
  recA Latilactobacillus sakei subsp. sakei 23K

70.94

99.153

0.703
  recA Streptococcus pneumoniae R6

64.384

100

0.664
  recA Streptococcus pneumoniae Rx1

64.384

100

0.664
  recA Streptococcus pneumoniae D39

64.384

100

0.664
  recA Streptococcus pneumoniae TIGR4

64.384

100

0.664
  recA Streptococcus pyogenes NZ131

65.537

100

0.655
  recA Streptococcus mitis NCTC 12261

63.989

100

0.653
  recA Streptococcus mitis SK321

63.435

100

0.647
  recA Streptococcus mutans UA159

63.611

100

0.647
  recA Neisseria gonorrhoeae MS11

65.598

96.893

0.636
  recA Neisseria gonorrhoeae MS11

65.598

96.893

0.636
  recA Neisseria gonorrhoeae strain FA1090

65.598

96.893

0.636
  recA Lactococcus lactis subsp. cremoris KW2

66.168

94.35

0.624
  recA Acinetobacter baylyi ADP1

64.14

96.893

0.621
  recA Glaesserella parasuis strain SC1401

62.717

97.74

0.613
  recA Ralstonia pseudosolanacearum GMI1000

65.549

92.655

0.607
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

63.05

96.328

0.607
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

64.832

92.373

0.599
  recA Acinetobacter baumannii D1279779

62.242

95.763

0.596
  recA Vibrio cholerae O1 biovar El Tor strain E7946

65.421

90.678

0.593
  recA Vibrio cholerae strain A1552

65.421

90.678

0.593
  recA Helicobacter pylori strain NCTC11637

64.308

91.808

0.59
  recA Helicobacter pylori 26695

64.308

91.808

0.59
  recA Pseudomonas stutzeri DSM 10701

62.918

92.938

0.585
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

64.062

90.395

0.579

Multiple sequence alignment