Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MKY04_RS07275 Genome accession   NZ_CP155468
Coordinates   1535128..1536384 (+) Length   418 a.a.
NCBI ID   WP_126293028.1    Uniprot ID   A0A431UWB9
Organism   Lysinibacillus telephonicus strain FSL R5-0572     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1530128..1541384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY04_RS07250 (MKY04_07250) - 1531227..1531955 (+) 729 WP_126293023.1 SDR family oxidoreductase -
  MKY04_RS07255 (MKY04_07255) - 1531999..1532256 (+) 258 WP_126293024.1 DUF3243 domain-containing protein -
  MKY04_RS07260 (MKY04_07260) - 1532553..1533344 (+) 792 WP_126293025.1 DUF3388 domain-containing protein -
  MKY04_RS07265 (MKY04_07265) - 1533621..1534487 (+) 867 WP_346235572.1 RodZ domain-containing protein -
  MKY04_RS07270 (MKY04_07270) pgsA 1534536..1535114 (+) 579 WP_126293027.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKY04_RS07275 (MKY04_07275) cinA 1535128..1536384 (+) 1257 WP_126293028.1 competence/damage-inducible protein A Machinery gene
  MKY04_RS07280 (MKY04_07280) recA 1536683..1537747 (+) 1065 WP_126293029.1 recombinase RecA Machinery gene
  MKY04_RS07285 (MKY04_07285) rny 1538429..1539985 (+) 1557 WP_346235573.1 ribonuclease Y -
  MKY04_RS07290 (MKY04_07290) - 1540128..1540880 (+) 753 WP_346235574.1 CpsB/CapC family capsule biosynthesis tyrosine phosphatase -

Sequence

Protein


Download         Length: 418 a.a.        Molecular weight: 45164.45 Da        Isoelectric Point: 4.7822

>NTDB_id=996666 MKY04_RS07275 WP_126293028.1 1535128..1536384(+) (cinA) [Lysinibacillus telephonicus strain FSL R5-0572]
MNAEIIAVGSELLLGQIANTNAKFISTQLSELGINVFYHTAVGDNAGRLKDVIEIAESRSDLIIFSGGLGPTKDDLTKET
IANHLGVPLVFDNVALTYIEEYFAQRGREMTENNRKQALVLEGSKVLANHHGMAPGMILEQNGRTYILLPGPPKEIEPMF
QFEVKPKLAALLNDGGVIVSHVLRFYGIGEAELEVQVQDILDNQSNPTVAPLASDGEVTLRITAKANSENEAWDLIKAKE
GEILNIVGEYHYGNNDDSLASKTVEMLLHNKLTISAAESLTAGLFQSELAEIPGVSSILVGGVVTYTEQAKVTQLGIEKS
FLDEFGIVSSECAAAMASKVRQKFGTDIGIGLTGAAGPEPHDGQAAGTIWIGFSIGDSDPITRKLQLSGMRNTNRIRAVK
LAFSYLMRLLHEKGYEKV

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=996666 MKY04_RS07275 WP_126293028.1 1535128..1536384(+) (cinA) [Lysinibacillus telephonicus strain FSL R5-0572]
ATGAATGCGGAAATTATAGCGGTTGGGTCCGAATTATTGCTCGGTCAAATTGCAAATACCAATGCAAAATTTATTTCAAC
TCAATTATCTGAACTTGGCATCAATGTTTTTTATCATACAGCTGTTGGAGATAATGCTGGACGTTTAAAAGATGTAATTG
AGATTGCAGAATCACGCTCAGATTTAATTATATTCTCTGGTGGGCTTGGACCAACTAAAGATGATTTAACAAAGGAAACA
ATTGCAAATCATCTTGGTGTACCACTAGTCTTTGATAATGTAGCGTTAACTTATATTGAAGAATACTTCGCCCAACGTGG
ACGGGAGATGACAGAAAATAACCGCAAGCAAGCACTTGTGCTTGAAGGAAGCAAAGTGCTTGCTAATCATCATGGCATGG
CACCTGGAATGATTTTAGAACAGAATGGCCGCACATACATATTACTTCCAGGGCCGCCAAAAGAAATAGAACCAATGTTT
CAGTTTGAAGTTAAGCCTAAACTTGCTGCGCTTCTAAATGATGGCGGTGTTATTGTTTCTCATGTTTTACGTTTTTATGG
TATTGGTGAAGCCGAGCTTGAAGTACAGGTACAGGATATTTTAGATAATCAATCAAATCCAACTGTTGCACCCTTAGCTT
CTGATGGTGAGGTAACATTGCGTATTACAGCTAAAGCGAATTCAGAAAATGAAGCTTGGGATTTGATAAAAGCTAAAGAA
GGTGAAATTTTAAACATTGTTGGTGAATACCATTACGGGAATAATGACGATTCATTAGCCTCAAAAACAGTCGAAATGCT
ACTCCATAATAAATTAACAATTTCTGCGGCAGAAAGTTTAACAGCAGGATTGTTTCAATCGGAGCTTGCTGAAATTCCAG
GTGTAAGCAGTATACTAGTTGGTGGAGTCGTAACATATACTGAACAGGCGAAAGTAACTCAGCTTGGTATTGAAAAGTCA
TTTTTAGATGAGTTCGGTATTGTTAGCAGCGAATGTGCAGCCGCTATGGCTTCTAAAGTACGTCAAAAGTTTGGAACAGA
TATTGGTATCGGCTTAACTGGCGCTGCTGGACCAGAACCACATGACGGCCAAGCTGCAGGAACAATTTGGATTGGATTTA
GTATTGGAGATTCTGATCCAATTACTCGCAAGCTTCAGCTTTCAGGCATGCGCAATACAAACCGAATACGCGCCGTTAAA
CTAGCATTCAGCTACTTGATGAGATTGTTACATGAAAAAGGTTATGAAAAAGTATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(257-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A431UWB9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

55.34

98.565

0.545
  cinA Streptococcus mitis SK321

48.303

91.627

0.443
  cinA Streptococcus mutans UA159

44.444

99.043

0.44
  cinA Streptococcus mitis NCTC 12261

47.781

91.627

0.438
  cinA Streptococcus pneumoniae TIGR4

47.52

91.627

0.435
  cinA Streptococcus pneumoniae Rx1

47.52

91.627

0.435
  cinA Streptococcus pneumoniae R6

47.52

91.627

0.435
  cinA Streptococcus pneumoniae D39

47.258

91.627

0.433
  cinA Streptococcus suis isolate S10

41.799

90.431

0.378

Multiple sequence alignment