Detailed information NTG0993559

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SP119_RS04925
• Genome accession: NZ_LR031521
• Coordinates: 939358..940428 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain S119 isolate S119
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 934358..945428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP119_RS04905 (SP119_0914)	citX	934938..935516 (+)	579	WP_010922331.1	citrate lyase holo-[acyl-carrier protein] synthase	-
SP119_RS04910 (SP119_0915)	-	935531..936925 (+)	1395	WP_011285541.1	oxaloacetate decarboxylase subunit alpha	-
SP119_RS04915 (SP119_0916)	citC	937035..938087 (-)	1053	WP_011017789.1	[citrate (pro-3S)-lyase] ligase	-
SP119_RS04920 (SP119_0917)	-	938176..938658 (-)	483	WP_010922334.1	PASTA domain-containing protein	-
SP119_RS04925 (SP119_0918)	xerS	939358..940428 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
SP119_RS04930 (SP119_0919)	-	940897..941595 (+)	699	WP_002993300.1	XRE family transcriptional regulator	-
SP119_RS04935 (SP119_0920)	ffh	941712..943274 (-)	1563	WP_011285545.1	signal recognition particle protein	-
SP119_RS04940 (SP119_0921)	-	943289..943621 (-)	333	WP_002989745.1	putative DNA-binding protein	-
SP119_RS04945 (SP119_0922)	-	943719..944417 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=993559 SP119_RS04925 WP_002984598.1 939358..940428(-) (xerS) [Streptococcus pyogenes strain S119 isolate S119]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=993559 SP119_RS04925 WP_002984598.1 939358..940428(-) (xerS) [Streptococcus pyogenes strain S119 isolate S119]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCCTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806