Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   AAHN93_RS11365 Genome accession   NZ_CP154474
Coordinates   2549571..2550638 (+) Length   355 a.a.
NCBI ID   WP_095552384.1    Uniprot ID   A0A2A2AWU8
Organism   Vandammella animalimorsus strain W29-2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2544571..2555638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHN93_RS11345 (AAHN93_11345) - 2545933..2546649 (+) 717 WP_343292553.1 SPOR domain-containing protein -
  AAHN93_RS11350 (AAHN93_11350) - 2546712..2547482 (-) 771 WP_343292554.1 hypothetical protein -
  AAHN93_RS11355 (AAHN93_11355) pilA 2547571..2548110 (-) 540 WP_343292555.1 pilin Machinery gene
  AAHN93_RS11360 (AAHN93_11360) - 2548445..2549146 (-) 702 WP_124857713.1 FHA domain-containing protein -
  AAHN93_RS11365 (AAHN93_11365) recA 2549571..2550638 (+) 1068 WP_095552384.1 recombinase RecA Machinery gene
  AAHN93_RS11370 (AAHN93_11370) recX 2550638..2551330 (+) 693 WP_343292556.1 recombination regulator RecX -
  AAHN93_RS11375 (AAHN93_11375) - 2551423..2551737 (+) 315 WP_343292557.1 hypothetical protein -
  AAHN93_RS11380 (AAHN93_11380) - 2551861..2552676 (-) 816 WP_343292558.1 exosortase H-associated membrane protein -
  AAHN93_RS11385 (AAHN93_11385) xrtH 2552669..2553229 (-) 561 WP_343292559.1 exosortase H -
  AAHN93_RS11390 (AAHN93_11390) - 2553394..2553747 (-) 354 WP_095542277.1 RNA-binding protein -
  AAHN93_RS11395 (AAHN93_11395) - 2553992..2554153 (-) 162 WP_343292560.1 hypothetical protein -
  AAHN93_RS11400 (AAHN93_11400) - 2554229..2555371 (+) 1143 WP_343292561.1 homoserine O-acetyltransferase -

Sequence

Protein


Download         Length: 355 a.a.        Molecular weight: 37855.41 Da        Isoelectric Point: 4.8681

>NTDB_id=993559 AAHN93_RS11365 WP_095552384.1 2549571..2550638(+) (recA) [Vandammella animalimorsus strain W29-2]
MNASTANSEKAKALQAALAQIEKQFGKGTIMRLGEEEATQDIQVVSTGSLGLDVALGVGGLPRGRVIEIYGPESSGKTTL
TLQVIAEMQKLGGTCAFVDAEHALDVQYAGKLGVQVKDLLISQPDTGEQALEVVDSLVRSGAVDLVVVDSVAALTPKAEI
EGDMGDALPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAIKKGD
EVIGNETKVKVVKNKVSPPFKTAQFDIMFGSGISREGEIIDMGVLGRIVDKSGAWYSYNGEKIGQGRDNAKEFLKENPEL
AREIENKIRANLGVVAATMAELPDGVDEDGVLQDE

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=993559 AAHN93_RS11365 WP_095552384.1 2549571..2550638(+) (recA) [Vandammella animalimorsus strain W29-2]
ATGAACGCAAGTACCGCGAATTCAGAGAAGGCCAAGGCGCTGCAGGCGGCGCTGGCGCAGATTGAGAAACAGTTTGGCAA
GGGCACCATCATGCGCCTGGGCGAGGAGGAGGCCACGCAGGACATTCAGGTCGTCTCCACCGGCTCGCTGGGCCTGGATG
TGGCGTTGGGCGTGGGCGGGCTGCCGCGCGGGCGCGTGATCGAGATTTACGGGCCCGAGTCCTCGGGTAAGACCACGCTG
ACGCTGCAAGTCATTGCCGAGATGCAAAAGCTCGGCGGCACCTGCGCCTTCGTCGATGCCGAGCACGCGCTGGATGTGCA
GTACGCGGGCAAGCTGGGCGTGCAGGTCAAGGATTTGCTCATTTCCCAGCCGGACACGGGCGAGCAGGCGCTGGAGGTGG
TGGACAGCCTGGTGCGCTCGGGCGCGGTTGATCTGGTGGTGGTCGATTCGGTGGCCGCACTGACGCCCAAGGCCGAGATC
GAGGGCGACATGGGCGATGCGCTGCCGGGCCTGCAGGCGCGGCTGATGAGCCAGGCGTTGCGCAAGCTCACGGCCACCAT
CAAGAAGACCAATTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATTGGCGTGATGTTTGGCAGCCCAGAGACCA
CCACCGGCGGCAATGCGCTGAAGTTCTACGCCAGCGTGCGCCTGGACATCCGCCGCACCGGCGCCATCAAGAAGGGCGAT
GAGGTCATCGGCAACGAAACCAAGGTCAAGGTGGTGAAGAACAAGGTTTCGCCGCCGTTCAAGACGGCGCAGTTCGACAT
CATGTTCGGCAGCGGCATCTCACGCGAAGGCGAGATCATCGACATGGGCGTGTTGGGCCGCATCGTGGACAAATCCGGCG
CCTGGTATTCCTATAACGGCGAGAAGATCGGTCAGGGGCGCGACAACGCCAAAGAGTTCCTGAAAGAAAACCCGGAGCTG
GCGCGCGAAATCGAGAACAAGATCCGTGCCAATCTGGGCGTCGTGGCCGCCACCATGGCCGAGCTGCCCGATGGCGTGGA
CGAAGACGGCGTGCTGCAAGACGAGTGA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(12-274)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A2AWU8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Ralstonia pseudosolanacearum GMI1000

79.539

97.746

0.777
  recA Pseudomonas stutzeri DSM 10701

71.513

94.93

0.679
  recA Glaesserella parasuis strain SC1401

67.898

99.155

0.673
  recA Neisseria gonorrhoeae strain FA1090

72.561

92.394

0.67
  recA Neisseria gonorrhoeae MS11

72.561

92.394

0.67
  recA Neisseria gonorrhoeae MS11

72.561

92.394

0.67
  recA Acinetobacter baylyi ADP1

67.93

96.62

0.656
  recA Acinetobacter baumannii D1279779

70.552

91.831

0.648
  recA Vibrio cholerae strain A1552

70.245

91.831

0.645
  recA Vibrio cholerae O1 biovar El Tor strain E7946

70.245

91.831

0.645
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

68.389

92.676

0.634
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

67.066

94.085

0.631
  recA Helicobacter pylori strain NCTC11637

65.782

95.493

0.628
  recA Helicobacter pylori 26695

65.487

95.493

0.625
  recA Bacillus subtilis subsp. subtilis str. 168

66.055

92.113

0.608
  recA Latilactobacillus sakei subsp. sakei 23K

61.516

96.62

0.594
  recA Streptococcus pyogenes NZ131

62.31

92.676

0.577
  recA Streptococcus pneumoniae Rx1

61.446

93.521

0.575
  recA Streptococcus pneumoniae R6

61.446

93.521

0.575
  recA Streptococcus pneumoniae TIGR4

61.446

93.521

0.575
  recA Streptococcus pneumoniae D39

61.446

93.521

0.575
  recA Streptococcus mitis SK321

61.145

93.521

0.572
  recA Streptococcus mitis NCTC 12261

61.145

93.521

0.572
  recA Streptococcus mutans UA159

61.329

93.239

0.572
  recA Lactococcus lactis subsp. cremoris KW2

60.542

93.521

0.566
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

59.159

93.803

0.555

Multiple sequence alignment