Detailed information NTG0988221

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AAD080_RS02550
• Genome accession: NZ_CP152307
• Coordinates: 546377..547426 (+)
• Length: 349 a.a.
• NCBI ID: WP_342608082.1
• Uniprot ID: -
• Organism: Vibrio tritonius strain JCM 16457 isolate MA35
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 541377..552426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAD080_RS02535	rpoS	542006..543007 (+)	1002	WP_068712068.1	RNA polymerase sigma factor RpoS	Regulator
AAD080_RS02540	mutS	543086..545650 (-)	2565	WP_342608080.1	DNA mismatch repair protein MutS	-
AAD080_RS02545	-	545735..546220 (+)	486	WP_342608081.1	CinA family protein	-
AAD080_RS02550	recA	546377..547426 (+)	1050	WP_342608082.1	recombinase RecA	Machinery gene
AAD080_RS02555	recX	547494..547964 (+)	471	WP_342608083.1	recombination regulator RecX	-
AAD080_RS02560	alaS	548121..550703 (+)	2583	WP_342608084.1	alanine--tRNA ligase	-
AAD080_RS02565	-	550899..552086 (+)	1188	WP_342608085.1	aspartate kinase	-
AAD080_RS02570	csrA	552178..552375 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37706.15 Da
• Isoelectric Point: 5.0719

>NTDB_id=988221 AAD080_RS02550 WP_342608082.1 546377..547426(+) (recA) [Vibrio tritonius strain JCM 16457 isolate MA35]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPIYARKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKASNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQGKANSCKYLKENTHIAHELDT
KLRDMLLSPVSEADVEEVDAKAAPEQEEL

Nucleotide

• Length: 1050 bp

>NTDB_id=988221 AAD080_RS02550 WP_342608082.1 546377..547426(+) (recA) [Vibrio tritonius strain JCM 16457 isolate MA35]
ATGGACGAAAATAAACAGAAGGCTCTCGCAGCAGCCCTAGGTCAAATTGAGAAACAATTCGGTAAAGGTTCCATTATGCG
CCTTGGTGACAACCGCACAATGGATGTAGAAACGATTTCTACAGGTTCTCTCTCTCTAGACATCGCGTTAGGTGCTGGTG
GTTTACCAATGGGCCGTATCGTTGAAATCTATGGTCCAGAATCATCAGGTAAAACAACCCTTACTCTTGAACTTATCGCA
GCAGCGCAACGTGAAGGTAAAACCTGTGCGTTTATCGATGCAGAGCACGCGCTTGACCCTATCTACGCTCGTAAATTGGG
TGTAAATATCGATGAACTTTTGGTTTCTCAACCAGATACAGGTGAACAAGCACTTGAAATCTGTGATGCTTTGGCTCGTT
CTGGCGCGGTTGATGTTATGGTTGTCGACTCGGTTGCGGCATTGACTCCTAAAGCTGAAATTGAAGGCGAAATGGGTGAT
AGCCACATGGGTCTGCAAGCTCGTATGCTTTCTCAAGCGATGCGTAAGCTAACTGGTAACCTAAAAGCCTCTAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACTACAGGTGGTAACGCAC
TTAAATTCTACGCTTCTGTTCGTCTTGATATTCGTCGTACTGGCGCAATCAAAGAAGGTGATGAAGTTGTGGGTAACGAA
ACTCGCATCAAAGTAGTGAAAAACAAAATTGCTGCACCATTTAAAGAAGCCAACACGCAAATTATGTATGGCCAAGGCTT
TAACCGTGAAGGTGAGCTAATCGACCTGGGTGTTAAACACAAATTGGTTGAAAAAGCAGGTGCATGGTATAGCTACAATG
GCGACAAAATTGGCCAAGGTAAAGCAAATTCGTGTAAGTATCTAAAAGAGAACACACATATTGCGCATGAGTTAGATACT
AAACTACGCGATATGCTGCTTAGCCCTGTGTCAGAAGCTGATGTAGAAGAAGTGGATGCAAAAGCAGCCCCTGAGCAAGA
AGAGCTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.802	100	0.908
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.802	100	0.908
recA	Pseudomonas stutzeri DSM 10701	72.493	100	0.725
recA	Acinetobacter baylyi ADP1	70.725	98.854	0.699
recA	Acinetobacter baumannii D1279779	74.39	93.983	0.699
recA	Glaesserella parasuis strain SC1401	69.741	99.427	0.693
recA	Neisseria gonorrhoeae MS11	69.136	92.837	0.642
recA	Neisseria gonorrhoeae MS11	69.136	92.837	0.642
recA	Neisseria gonorrhoeae strain FA1090	69.136	92.837	0.642
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.112	0.633
recA	Streptococcus pneumoniae D39	60.227	100	0.607
recA	Streptococcus pneumoniae TIGR4	60.227	100	0.607
recA	Streptococcus pneumoniae Rx1	60.227	100	0.607
recA	Streptococcus pneumoniae R6	60.227	100	0.607
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.691	93.696	0.587
recA	Streptococcus mutans UA159	58.286	100	0.585
recA	Streptococcus mitis NCTC 12261	62.539	92.55	0.579
recA	Helicobacter pylori strain NCTC11637	58.551	98.854	0.579
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	91.977	0.579
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.843	95.129	0.579
recA	Helicobacter pylori 26695	58.261	98.854	0.576
recA	Streptococcus mitis SK321	62.229	92.55	0.576
recA	Streptococcus pyogenes NZ131	61.231	93.123	0.57
recA	Latilactobacillus sakei subsp. sakei 23K	59.581	95.702	0.57
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.182	94.269	0.567
recA	Lactococcus lactis subsp. cremoris KW2	60.681	92.55	0.562