Detailed information NTG0970414

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: VUK78_RS13465
• Genome accession: NZ_CP150467
• Coordinates: 607778..608821 (+)
• Length: 347 a.a.
• NCBI ID: WP_005436413.1
• Uniprot ID: A0A9X3RWW6
• Organism: Vibrio harveyi strain NH-LM1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 602778..613821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VUK78_RS13450 (VUK78_13450)	rpoS	603370..604353 (+)	984	WP_340700201.1	RNA polymerase sigma factor RpoS	Regulator
VUK78_RS13455 (VUK78_13455)	mutS	604447..607008 (-)	2562	WP_340700202.1	DNA mismatch repair protein MutS	-
VUK78_RS13460 (VUK78_13460)	pncC	607094..607576 (+)	483	WP_009703950.1	nicotinamide-nucleotide amidase	-
VUK78_RS13465 (VUK78_13465)	recA	607778..608821 (+)	1044	WP_005436413.1	recombinase RecA	Machinery gene
VUK78_RS13470 (VUK78_13470)	recX	609028..609495 (+)	468	WP_005425358.1	recombination regulator RecX	-
VUK78_RS13475 (VUK78_13475)	alaS	609638..612220 (+)	2583	WP_340700203.1	alanine--tRNA ligase	-
VUK78_RS13480 (VUK78_13480)	-	612424..613611 (+)	1188	WP_340700204.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37458.90 Da
• Isoelectric Point: 4.9743

>NTDB_id=970414 VUK78_RS13465 WP_005436413.1 607778..608821(+) (recA) [Vibrio harveyi strain NH-LM1]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYQGDKIGQGKANACNYLRENPEIGKTIDT
KLREMLLSPALPEAPESGEKSEQEEEF

Nucleotide

• Length: 1044 bp

>NTDB_id=970414 VUK78_RS13465 WP_005436413.1 607778..608821(+) (recA) [Vibrio harveyi strain NH-LM1]
ATGGACGAGAACAAACAGAAAGCGCTCGCCGCTGCGCTAGGTCAAATTGAAAAGCAATTCGGTAAAGGCTCTATTATGCG
CCTTGGTGATAACCGCGCAATGGACGTAGAAACCATCTCAACGGGTTCTCTTTCTCTTGATATCGCTTTGGGTGCTGGTG
GTCTACCAATGGGTCGTATCGTAGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACGCTAACTCTTGAGCTGATCGCT
GCTGCGCAACGTGAAGGCAAAACTTGTGCGTTTATCGATGCAGAGCACGCGCTAGACCCTGTATATGCGAAGAAACTTGG
CGTTGATATCGATGCACTATTGGTTTCTCAGCCAGACACAGGTGAGCAAGCGCTAGAGATCTGTGACGCACTTGCACGTT
CTGGTGCTATTGACGTTATGGTTGTTGACTCTGTTGCAGCACTAACACCAAAAGCAGAAATTGAAGGCGAGATGGGTGAC
AGCCACATGGGTCTTCAAGCACGTATGCTTTCTCAAGCGATGCGTAAGCTAACGGGTAACCTAAAGCAATCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACAACGACTGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGTCTAGATATCCGTCGTACTGGCGCAATCAAAGAAGGTGACGAAGTAGTAGGTAACGAA
ACGCGCATCAAAGTTGTTAAGAACAAGATTGCTGCACCGTTTAAAGAAGCAAACACGCAAATCATGTACGGCCAAGGCTT
CAACCGCGAAGGCGAACTGATTGACCTAGGCGTGAAGCACAAGTTAGTTGAAAAAGCAGGTGCATGGTACAGCTACCAAG
GCGACAAGATTGGTCAAGGTAAAGCAAACGCTTGTAACTACCTACGCGAAAACCCAGAAATCGGTAAGACTATCGATACT
AAACTGCGTGAAATGCTACTTTCACCAGCACTACCTGAAGCACCAGAATCAGGTGAAAAATCAGAGCAAGAAGAAGAGTT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	95.441	94.813	0.905
recA	Vibrio cholerae O1 biovar El Tor strain E7946	95.441	94.813	0.905
recA	Acinetobacter baylyi ADP1	72.543	99.712	0.723
recA	Pseudomonas stutzeri DSM 10701	75.841	94.236	0.715
recA	Acinetobacter baumannii D1279779	75	94.524	0.709
recA	Glaesserella parasuis strain SC1401	70.859	93.948	0.666
recA	Neisseria gonorrhoeae MS11	68.712	93.948	0.646
recA	Neisseria gonorrhoeae MS11	68.712	93.948	0.646
recA	Neisseria gonorrhoeae strain FA1090	68.712	93.948	0.646
recA	Ralstonia pseudosolanacearum GMI1000	71.061	89.625	0.637
recA	Helicobacter pylori strain NCTC11637	60.882	97.983	0.597
recA	Helicobacter pylori 26695	60.588	97.983	0.594
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	91.931	0.585
recA	Streptococcus pneumoniae R6	62.539	93.084	0.582
recA	Streptococcus pneumoniae Rx1	62.539	93.084	0.582
recA	Streptococcus pneumoniae D39	62.539	93.084	0.582
recA	Streptococcus pneumoniae TIGR4	62.539	93.084	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.507	0.582
recA	Streptococcus mitis NCTC 12261	62.229	93.084	0.579
recA	Streptococcus mitis SK321	61.92	93.084	0.576
recA	Streptococcus mutans UA159	60.923	93.66	0.571
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.389	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.507	0.568
recA	Streptococcus pyogenes NZ131	60.615	93.66	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	59.215	95.389	0.565
recA	Lactococcus lactis subsp. cremoris KW2	60.062	93.084	0.559