Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | VKP40_RS08620 | Genome accession | NZ_CP142355 |
| Coordinates | 1734901..1736037 (-) | Length | 378 a.a. |
| NCBI ID | WP_002992179.1 | Uniprot ID | A0A4Q1QZP2 |
| Organism | Streptococcus pyogenes strain A946 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1726405..1754154 | 1734901..1736037 | within | 0 |
Gene organization within MGE regions
Location: 1726405..1754154
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VKP40_RS08570 (VKP40_08570) | nrdG | 1726405..1727019 (-) | 615 | WP_021775544.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| VKP40_RS08575 (VKP40_08575) | - | 1727034..1727528 (-) | 495 | WP_011055085.1 | GNAT family N-acetyltransferase | - |
| VKP40_RS08580 (VKP40_08580) | - | 1727537..1728472 (-) | 936 | WP_111686419.1 | Gfo/Idh/MocA family protein | - |
| VKP40_RS08585 (VKP40_08585) | - | 1728501..1728647 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| VKP40_RS08590 (VKP40_08590) | nrdD | 1728829..1731027 (-) | 2199 | WP_002992831.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| VKP40_RS08595 (VKP40_08595) | - | 1731124..1732683 (-) | 1560 | WP_002992833.1 | membrane protein | - |
| VKP40_RS08600 (VKP40_08600) | - | 1733096..1733401 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| VKP40_RS08605 (VKP40_08605) | ruvX | 1733413..1733832 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| VKP40_RS08610 (VKP40_08610) | - | 1733829..1734098 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| VKP40_RS08615 (VKP40_08615) | spx | 1734212..1734610 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| VKP40_RS08620 (VKP40_08620) | recA | 1734901..1736037 (-) | 1137 | WP_002992179.1 | recombinase RecA | Machinery gene |
| VKP40_RS08625 (VKP40_08625) | cinA | 1736126..1737397 (-) | 1272 | WP_002992182.1 | competence/damage-inducible protein A | Machinery gene |
| VKP40_RS08630 (VKP40_08630) | - | 1737466..1738026 (-) | 561 | WP_002992183.1 | DNA-3-methyladenine glycosylase I | - |
| VKP40_RS08635 (VKP40_08635) | ruvA | 1738036..1738632 (-) | 597 | WP_002992186.1 | Holliday junction branch migration protein RuvA | - |
| VKP40_RS08640 (VKP40_08640) | - | 1738634..1739854 (-) | 1221 | WP_002992187.1 | MDR family MFS transporter | - |
| VKP40_RS08645 (VKP40_08645) | mutL | 1739865..1741847 (-) | 1983 | WP_326675770.1 | DNA mismatch repair endonuclease MutL | - |
| VKP40_RS08650 (VKP40_08650) | - | 1741942..1743093 (-) | 1152 | WP_003058754.1 | tyrosine-type recombinase/integrase | - |
| VKP40_RS08655 (VKP40_08655) | - | 1743342..1743485 (+) | 144 | WP_011185066.1 | putative holin-like toxin | - |
| VKP40_RS08660 (VKP40_08660) | - | 1744334..1745101 (-) | 768 | WP_003058809.1 | helix-turn-helix transcriptional regulator | - |
| VKP40_RS08665 (VKP40_08665) | - | 1745255..1745461 (+) | 207 | WP_002992503.1 | helix-turn-helix transcriptional regulator | - |
| VKP40_RS08670 (VKP40_08670) | - | 1745495..1745683 (+) | 189 | Protein_1652 | helix-turn-helix domain-containing protein | - |
| VKP40_RS08675 (VKP40_08675) | - | 1745714..1746121 (+) | 408 | WP_002992501.1 | hypothetical protein | - |
| VKP40_RS08680 (VKP40_08680) | - | 1746134..1746256 (+) | 123 | WP_011285272.1 | hypothetical protein | - |
| VKP40_RS08685 (VKP40_08685) | - | 1746537..1747058 (+) | 522 | WP_247456465.1 | Rha family transcriptional regulator | - |
| VKP40_RS08690 (VKP40_08690) | - | 1747303..1747635 (+) | 333 | WP_002992497.1 | hypothetical protein | - |
| VKP40_RS08695 (VKP40_08695) | - | 1747635..1747826 (+) | 192 | WP_027968868.1 | hypothetical protein | - |
| VKP40_RS08700 (VKP40_08700) | - | 1747839..1748201 (+) | 363 | WP_000206026.1 | hypothetical protein | - |
| VKP40_RS08705 (VKP40_08705) | - | 1748198..1748527 (+) | 330 | WP_000174505.1 | hypothetical protein | - |
| VKP40_RS08710 (VKP40_08710) | - | 1748530..1748802 (+) | 273 | WP_000051914.1 | hypothetical protein | - |
| VKP40_RS08715 (VKP40_08715) | - | 1748803..1749660 (+) | 858 | WP_011185073.1 | primase alpha helix C-terminal domain-containing protein | - |
| VKP40_RS08720 (VKP40_08720) | - | 1749629..1751317 (+) | 1689 | WP_002992487.1 | DNA primase family protein | - |
| VKP40_RS08725 (VKP40_08725) | - | 1751604..1751777 (+) | 174 | WP_109981952.1 | DUF2758 domain-containing protein | - |
| VKP40_RS08730 (VKP40_08730) | - | 1751783..1751956 (+) | 174 | WP_011185075.1 | hypothetical protein | - |
| VKP40_RS08735 (VKP40_08735) | - | 1751958..1752467 (+) | 510 | WP_011185076.1 | hypothetical protein | - |
| VKP40_RS08740 (VKP40_08740) | - | 1752542..1753030 (+) | 489 | WP_002992480.1 | hypothetical protein | - |
| VKP40_RS08745 (VKP40_08745) | - | 1753434..1753796 (+) | 363 | WP_002992136.1 | DUF1492 domain-containing protein | - |
| VKP40_RS08750 (VKP40_08750) | - | 1753771..1754154 (+) | 384 | WP_011185077.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40631.23 Da Isoelectric Point: 4.9004
>NTDB_id=925293 VKP40_RS08620 WP_002992179.1 1734901..1736037(-) (recA) [Streptococcus pyogenes strain A946]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=925293 VKP40_RS08620 WP_002992179.1 1734901..1736037(-) (recA) [Streptococcus pyogenes strain A946]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.