Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | VKP39_RS08200 | Genome accession | NZ_CP142353 |
| Coordinates | 1663793..1664929 (-) | Length | 378 a.a. |
| NCBI ID | WP_002992179.1 | Uniprot ID | A0A4Q1QZP2 |
| Organism | Streptococcus pyogenes strain D641 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1655296..1683670 | 1663793..1664929 | within | 0 |
Gene organization within MGE regions
Location: 1655296..1683670
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VKP39_RS08150 (VKP39_08150) | nrdG | 1655296..1655910 (-) | 615 | WP_002982219.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| VKP39_RS08155 (VKP39_08155) | - | 1655910..1656419 (-) | 510 | WP_002991345.1 | GNAT family N-acetyltransferase | - |
| VKP39_RS08160 (VKP39_08160) | - | 1656428..1657363 (-) | 936 | WP_326623859.1 | Gfo/Idh/MocA family oxidoreductase | - |
| VKP39_RS08165 (VKP39_08165) | - | 1657392..1657538 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| VKP39_RS08170 (VKP39_08170) | nrdD | 1657720..1659918 (-) | 2199 | WP_002992831.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| VKP39_RS08175 (VKP39_08175) | - | 1660015..1661574 (-) | 1560 | WP_002992833.1 | membrane protein | - |
| VKP39_RS08180 (VKP39_08180) | - | 1661987..1662292 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| VKP39_RS08185 (VKP39_08185) | ruvX | 1662304..1662723 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| VKP39_RS08190 (VKP39_08190) | - | 1662720..1662989 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| VKP39_RS08195 (VKP39_08195) | spx | 1663104..1663502 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| VKP39_RS08200 (VKP39_08200) | recA | 1663793..1664929 (-) | 1137 | WP_002992179.1 | recombinase RecA | Machinery gene |
| VKP39_RS08205 (VKP39_08205) | cinA | 1665018..1666289 (-) | 1272 | WP_002992182.1 | competence/damage-inducible protein A | Machinery gene |
| VKP39_RS08210 (VKP39_08210) | - | 1666358..1666918 (-) | 561 | WP_002992183.1 | DNA-3-methyladenine glycosylase I | - |
| VKP39_RS08215 (VKP39_08215) | ruvA | 1666928..1667524 (-) | 597 | WP_002992186.1 | Holliday junction branch migration protein RuvA | - |
| VKP39_RS08220 (VKP39_08220) | - | 1667526..1668746 (-) | 1221 | WP_002992187.1 | MDR family MFS transporter | - |
| VKP39_RS08225 (VKP39_08225) | mutL | 1668757..1670739 (-) | 1983 | WP_326623860.1 | DNA mismatch repair endonuclease MutL | - |
| VKP39_RS08230 (VKP39_08230) | - | 1670834..1671985 (-) | 1152 | WP_014635780.1 | tyrosine-type recombinase/integrase | - |
| VKP39_RS08235 (VKP39_08235) | - | 1672234..1672377 (+) | 144 | WP_011185066.1 | putative holin-like toxin | - |
| VKP39_RS08240 (VKP39_08240) | - | 1673238..1674005 (-) | 768 | WP_003058809.1 | helix-turn-helix transcriptional regulator | - |
| VKP39_RS08245 (VKP39_08245) | - | 1674159..1674365 (+) | 207 | WP_002992503.1 | helix-turn-helix transcriptional regulator | - |
| VKP39_RS08250 (VKP39_08250) | - | 1674399..1675166 (+) | 768 | WP_080277853.1 | Bro-N domain-containing protein | - |
| VKP39_RS08255 (VKP39_08255) | - | 1675176..1675787 (+) | 612 | WP_326623861.1 | Bro-N domain-containing protein | - |
| VKP39_RS08260 (VKP39_08260) | - | 1675807..1676214 (+) | 408 | WP_136262270.1 | hypothetical protein | - |
| VKP39_RS08265 (VKP39_08265) | - | 1676227..1676844 (+) | 618 | WP_326623862.1 | Rha family transcriptional regulator | - |
| VKP39_RS08270 (VKP39_08270) | - | 1677089..1677421 (+) | 333 | WP_326623863.1 | hypothetical protein | - |
| VKP39_RS08275 (VKP39_08275) | - | 1677418..1677558 (+) | 141 | WP_326623864.1 | hypothetical protein | - |
| VKP39_RS08280 (VKP39_08280) | - | 1677539..1677736 (+) | 198 | WP_326623865.1 | hypothetical protein | - |
| VKP39_RS08285 (VKP39_08285) | - | 1677748..1678077 (+) | 330 | WP_111681410.1 | hypothetical protein | - |
| VKP39_RS08290 (VKP39_08290) | - | 1678080..1678352 (+) | 273 | WP_001100459.1 | hypothetical protein | - |
| VKP39_RS08295 (VKP39_08295) | - | 1678353..1679210 (+) | 858 | WP_032463081.1 | primase alpha helix C-terminal domain-containing protein | - |
| VKP39_RS08300 (VKP39_08300) | - | 1679179..1680867 (+) | 1689 | WP_326623866.1 | phage/plasmid primase, P4 family | - |
| VKP39_RS08305 (VKP39_08305) | - | 1681154..1681327 (+) | 174 | WP_000694577.1 | hypothetical protein | - |
| VKP39_RS08310 (VKP39_08310) | - | 1681333..1681506 (+) | 174 | WP_014635784.1 | hypothetical protein | - |
| VKP39_RS08315 (VKP39_08315) | - | 1681508..1682017 (+) | 510 | WP_014407945.1 | hypothetical protein | - |
| VKP39_RS08320 (VKP39_08320) | - | 1682091..1682579 (+) | 489 | WP_326623867.1 | hypothetical protein | - |
| VKP39_RS08325 (VKP39_08325) | - | 1682962..1683324 (+) | 363 | WP_326623868.1 | DUF1492 domain-containing protein | - |
| VKP39_RS08330 (VKP39_08330) | - | 1683299..1683670 (+) | 372 | WP_326623869.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40631.23 Da Isoelectric Point: 4.9004
>NTDB_id=925185 VKP39_RS08200 WP_002992179.1 1663793..1664929(-) (recA) [Streptococcus pyogenes strain D641]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=925185 VKP39_RS08200 WP_002992179.1 1663793..1664929(-) (recA) [Streptococcus pyogenes strain D641]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGTTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.