Detailed information NTG0092412

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU50_RS11875
• Genome accession: NZ_AP025514
• Coordinates: 2647114..2648154 (-)
• Length: 346 a.a.
• NCBI ID: WP_060468604.1
• Uniprot ID: A0A109D7L9
• Organism: Vibrio toranzoniae strain CECT 7225
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2642114..2653154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU50_RS11860	csrA	2642530..2642727 (-)	198	WP_009847619.1	carbon storage regulator CsrA	-
OCU50_RS11865	-	2642820..2644001 (-)	1182	WP_082710351.1	aspartate kinase	-
OCU50_RS11870	alaS	2644217..2646799 (-)	2583	WP_060468603.1	alanine--tRNA ligase	-
OCU50_RS11875	recA	2647114..2648154 (-)	1041	WP_060468604.1	recombinase RecA	Machinery gene
OCU50_RS11880	pncC	2648294..2648788 (-)	495	WP_060468640.1	nicotinamide-nucleotide amidase	-
OCU50_RS11885	mutS	2648913..2651474 (+)	2562	WP_060468605.1	DNA mismatch repair protein MutS	-
OCU50_RS11890	rpoS	2651610..2652590 (-)	981	WP_060468606.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37298.85 Da
• Isoelectric Point: 4.9843

>NTDB_id=92412 OCU50_RS11875 WP_060468604.1 2647114..2648154(-) (recA) [Vibrio toranzoniae strain CECT 7225]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEIALEIDT
KLRELLLTPAVLEEKGVEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=92412 OCU50_RS11875 WP_060468604.1 2647114..2648154(-) (recA) [Vibrio toranzoniae strain CECT 7225]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAACAATTTGGTAAAGGTTCTATCATGCG
TCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTTGGTGCTGGTG
GCCTACCGATGGGACGTATCGTAGAGGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCACAAAAAGTTGGCAAGACGTGTGCTTTCGTTGATGCGGAACACGCACTAGACCCTATCTACGCTCAAAAGCTTGG
TGTTGATATCGATGCACTTCTTGTTTCTCAACCTGATACGGGTGAGCAAGCATTAGAAATCTGTGATGCATTGGCTCGTT
CAGGTGCAATCGATGTGCTTGTTATTGACTCAGTAGCAGCACTAACACCAAAAGCAGAAATTGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAGGCTCGTATGCTTTCTCAAGCAATGCGTAAGTTAACAGGCAACCTTAAGCAGTCTAACTGTAT
GGCTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACAACAACAGGTGGTAATGCTC
TTAAGTTCTACGCATCTGTTCGTCTTGATATCCGCCGTACTGGTGCGATCAAAGATGGTGATGAGGTTGTTGGTAACGAA
ACGCGTATCAAGGTTGTTAAGAACAAAATCGCTGCACCATTCAAACAAGCTGAAACTCAAATCCTATACGGCAAAGGCTT
CAACCGTGAAGGTGAGCTTATCGATTTAGGTGTTAAGAACAAGCTAGTAGAAAAAGCGGGCGCTTGGTATAGCTACAAGG
GTGACAAGATCGGCCAAGGTAAAGCTAACGCTGGTAAGTACCTACGTGAAAACCCAGAGATTGCTCTGGAGATCGATACT
AAACTTCGTGAGTTGCTACTAACGCCTGCTGTTCTTGAAGAGAAAGGCGTAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A109D7L9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.274	95.087	0.858
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.274	95.087	0.858
recA	Pseudomonas stutzeri DSM 10701	76.435	95.665	0.731
recA	Acinetobacter baumannii D1279779	73.099	98.844	0.723
recA	Acinetobacter baylyi ADP1	71.965	100	0.72
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae strain FA1090	67.241	100	0.676
recA	Glaesserella parasuis strain SC1401	70.679	93.642	0.662
recA	Ralstonia pseudosolanacearum GMI1000	71.429	91.04	0.65
recA	Streptococcus mutans UA159	58.739	100	0.592
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.95	92.197	0.59
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	92.775	0.587
recA	Streptococcus pneumoniae TIGR4	62.229	93.353	0.581
recA	Streptococcus pneumoniae Rx1	62.229	93.353	0.581
recA	Streptococcus pneumoniae R6	62.229	93.353	0.581
recA	Streptococcus pneumoniae D39	62.229	93.353	0.581
recA	Streptococcus mitis NCTC 12261	61.92	93.353	0.578
recA	Helicobacter pylori strain NCTC11637	61.538	93.931	0.578
recA	Helicobacter pylori 26695	61.231	93.931	0.575
recA	Streptococcus mitis SK321	61.61	93.353	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.665	0.572
recA	Latilactobacillus sakei subsp. sakei 23K	58.235	98.266	0.572
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.775	0.569
recA	Streptococcus pyogenes NZ131	60.308	93.931	0.566
recA	Lactococcus lactis subsp. cremoris KW2	59.133	93.353	0.552