Detailed information NTG0092356

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV44_RS02590
• Genome accession: NZ_AP025510
• Coordinates: 532315..533355 (+)
• Length: 346 a.a.
• NCBI ID: WP_086048754.1
• Uniprot ID: -
• Organism: Vibrio tasmaniensis strain LMG 20012
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 527315..538355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV44_RS02575	rpoS	527870..528850 (+)	981	WP_086048752.1	RNA polymerase sigma factor RpoS	Regulator
OCV44_RS02580	mutS	528995..531556 (-)	2562	WP_086048753.1	DNA mismatch repair protein MutS	-
OCV44_RS02585	pncC	531681..532175 (+)	495	WP_086050375.1	nicotinamide-nucleotide amidase	-
OCV44_RS02590	recA	532315..533355 (+)	1041	WP_086048754.1	recombinase RecA	Machinery gene
OCV44_RS02595	-	533654..534454 (-)	801	WP_009847632.1	TrmB family transcriptional regulator	-
OCV44_RS02600	-	534509..535528 (-)	1020	WP_246091765.1	ROK family protein	-
OCV44_RS02605	-	535554..537392 (-)	1839	WP_139685033.1	glycoside hydrolase family 13 protein	-
OCV44_RS02610	-	537402..538235 (-)	834	WP_029223077.1	sugar ABC transporter permease	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37284.78 Da
• Isoelectric Point: 4.9843

>NTDB_id=92356 OCV44_RS02590 WP_086048754.1 532315..533355(+) (recA) [Vibrio tasmaniensis strain LMG 20012]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVALEIDT
KLRELLLTPAVLEEKGAEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=92356 OCV44_RS02590 WP_086048754.1 532315..533355(+) (recA) [Vibrio tasmaniensis strain LMG 20012]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCTATCATGCG
TCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCCTACCTATGGGACGTATCGTAGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCACAGAGAGTGGGCAAAACGTGTGCATTCGTTGATGCGGAGCACGCACTAGACCCTATCTACGCTCAAAAGTTGGG
TGTTGATATCGATGCTTTGCTTGTGTCTCAACCAGATACAGGCGAACAAGCTCTAGAAATTTGTGATGCACTGGCTCGTT
CAGGTGCTATCGACGTTCTTGTTATTGACTCAGTAGCAGCACTAACACCTAAAGCAGAAATCGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTTCAGGCTCGTATGCTTTCTCAAGCGATGCGTAAGCTGACTGGTAACCTCAAGCAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAAATTGGTGTTATGTTCGGTAACCCAGAAACAACAACCGGTGGTAACGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATTCGCCGTACTGGCGCGATTAAAGATGGTGATGAAGTTGTTGGTAACGAA
ACTCGCATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAAACTCAAATCCTTTACGGCAAAGGCTT
CAACCGCGAAGGTGAGCTTATCGACTTAGGTGTTAAGAATAAGCTAGTAGAAAAAGCAGGCGCTTGGTACAGCTACAAAG
GCGACAAGATCGGCCAAGGTAAAGCAAACGCTGGTAAATACCTACGTGAAAACCCAGAAGTTGCTCTAGAAATTGATACT
AAACTTCGTGAGTTACTGCTAACTCCTGCTGTGCTTGAAGAGAAAGGTGCAGAGAAGGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.274	95.087	0.858
recA	Vibrio cholerae strain A1552	90.274	95.087	0.858
recA	Pseudomonas stutzeri DSM 10701	76.435	95.665	0.731
recA	Acinetobacter baumannii D1279779	72.174	99.711	0.72
recA	Acinetobacter baylyi ADP1	71.387	100	0.714
recA	Neisseria gonorrhoeae MS11	66.667	100	0.671
recA	Neisseria gonorrhoeae MS11	66.667	100	0.671
recA	Neisseria gonorrhoeae strain FA1090	66.667	100	0.671
recA	Glaesserella parasuis strain SC1401	66.86	99.422	0.665
recA	Ralstonia pseudosolanacearum GMI1000	71.111	91.04	0.647
recA	Streptococcus mutans UA159	58.166	100	0.587
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	92.197	0.584
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.775	0.584
recA	Helicobacter pylori strain NCTC11637	61.231	93.931	0.575
recA	Streptococcus pneumoniae Rx1	61.61	93.353	0.575
recA	Streptococcus pneumoniae R6	61.61	93.353	0.575
recA	Streptococcus mitis SK321	61.61	93.353	0.575
recA	Streptococcus pneumoniae TIGR4	61.61	93.353	0.575
recA	Streptococcus pneumoniae D39	61.61	93.353	0.575
recA	Helicobacter pylori 26695	60.923	93.931	0.572
recA	Latilactobacillus sakei subsp. sakei 23K	58.235	98.266	0.572
recA	Streptococcus mitis NCTC 12261	61.3	93.353	0.572
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.665	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.059	92.775	0.566
recA	Streptococcus pyogenes NZ131	60	93.931	0.564
recA	Lactococcus lactis subsp. cremoris KW2	59.133	93.353	0.552