Detailed information NTG0092318

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU90_RS14625
• Genome accession: NZ_AP025508
• Coordinates: 3306319..3307359 (-)
• Length: 346 a.a.
• NCBI ID: WP_004735435.1
• Uniprot ID: A0A1R3F051
• Organism: Vibrio splendidus strain LMG 19031
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3301319..3312359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU90_RS14610	csrA	3301721..3301918 (-)	198	WP_004415691.1	carbon storage regulator CsrA	-
OCU90_RS14615	-	3302011..3303192 (-)	1182	WP_080583151.1	aspartate kinase	-
OCU90_RS14620	alaS	3303413..3305995 (-)	2583	WP_061022525.1	alanine--tRNA ligase	-
OCU90_RS14625	recA	3306319..3307359 (-)	1041	WP_004735435.1	recombinase RecA	Machinery gene
OCU90_RS14630	pncC	3307499..3307993 (-)	495	WP_029222254.1	nicotinamide-nucleotide amidase	-
OCU90_RS14635	mutS	3308118..3310679 (+)	2562	WP_061022527.1	DNA mismatch repair protein MutS	-
OCU90_RS14640	rpoS	3310824..3311804 (-)	981	WP_054541876.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37350.86 Da
• Isoelectric Point: 5.0836

>NTDB_id=92318 OCU90_RS14625 WP_004735435.1 3306319..3307359(-) (recA) [Vibrio splendidus strain LMG 19031]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKSNSCKHLRENPEIALELDT
KLRELLLTPAVLEEKGAEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=92318 OCU90_RS14625 WP_004735435.1 3306319..3307359(-) (recA) [Vibrio splendidus strain LMG 19031]
ATGGACGAGAATAAACAAAAAGCGTTAGCTGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCTATCATGCG
TCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCTTACCGATGGGACGTATCGTTGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCGCAGAGAGTGGGTAAAACGTGTGCATTCGTGGATGCGGAACACGCACTTGACCCTATCTATGCTCAAAAGTTGGG
TGTTGATATCGATGCTTTGCTTGTATCTCAACCTGATACCGGTGAACAAGCTCTAGAAATCTGTGATGCACTGGCTCGTT
CAGGTGCTATCGATGTTCTTGTTATTGACTCGGTTGCTGCACTAACACCTAAAGCAGAGATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAAGCGCGTATGCTTTCTCAAGCAATGCGTAAGCTGACAGGTAACCTTAAACAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTCGGTAACCCAGAAACAACAACAGGTGGTAATGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATTCGCCGTACTGGTGCAATCAAAGATGGTGATGAAGTTGTTGGTAACGAG
ACTCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAAACTCAAATCCTTTACGGCAAAGGCTT
CAACCGCGAAGGTGAGCTTATCGATTTAGGTGTTAAGAATAAGCTAGTAGAGAAAGCGGGCGCTTGGTACAGCTACAAAG
GCGACAAGATCGGCCAAGGTAAATCAAACTCTTGTAAGCACCTACGTGAAAACCCAGAGATCGCTCTGGAACTTGACACT
AAGCTTCGCGAATTGCTACTGACTCCTGCTGTTCTTGAAGAAAAAGGCGCAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A1R3F051

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.274	95.087	0.858
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.274	95.087	0.858
recA	Pseudomonas stutzeri DSM 10701	75.529	95.665	0.723
recA	Acinetobacter baumannii D1279779	71.884	99.711	0.717
recA	Acinetobacter baylyi ADP1	71.098	100	0.711
recA	Neisseria gonorrhoeae MS11	66.667	100	0.671
recA	Neisseria gonorrhoeae MS11	66.667	100	0.671
recA	Neisseria gonorrhoeae strain FA1090	66.667	100	0.671
recA	Glaesserella parasuis strain SC1401	67.151	99.422	0.668
recA	Ralstonia pseudosolanacearum GMI1000	70.794	91.04	0.645
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	92.197	0.587
recA	Streptococcus mutans UA159	57.88	100	0.584
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.775	0.581
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.665	0.572
recA	Streptococcus pneumoniae Rx1	60.991	93.353	0.569
recA	Streptococcus pneumoniae R6	60.991	93.353	0.569
recA	Streptococcus pneumoniae D39	60.991	93.353	0.569
recA	Streptococcus pneumoniae TIGR4	60.991	93.353	0.569
recA	Helicobacter pylori strain NCTC11637	60.615	93.931	0.569
recA	Helicobacter pylori 26695	60.308	93.931	0.566
recA	Streptococcus mitis NCTC 12261	60.681	93.353	0.566
recA	Streptococcus mitis SK321	60.372	93.353	0.564
recA	Latilactobacillus sakei subsp. sakei 23K	57.353	98.266	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.436	92.775	0.561
recA	Streptococcus pyogenes NZ131	59.077	93.931	0.555
recA	Lactococcus lactis subsp. cremoris KW2	57.895	93.353	0.54