Detailed information NTG0092181

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV49_RS02385
• Genome accession: NZ_AP025499
• Coordinates: 476782..477822 (+)
• Length: 346 a.a.
• NCBI ID: WP_029223240.1
• Uniprot ID: A0A1R3EA59
• Organism: Vibrio lentus strain LMG 21034
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 471782..482822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV49_RS02370	rpoS	472336..473316 (+)	981	WP_029223238.1	RNA polymerase sigma factor RpoS	Regulator
OCV49_RS02375	mutS	473463..476024 (-)	2562	WP_102383514.1	DNA mismatch repair protein MutS	-
OCV49_RS02380	pncC	476148..476642 (+)	495	WP_029223239.1	nicotinamide-nucleotide amidase	-
OCV49_RS02385	recA	476782..477822 (+)	1041	WP_029223240.1	recombinase RecA	Machinery gene
OCV49_RS02390	-	478000..478953 (-)	954	WP_225998355.1	winged helix-turn-helix domain-containing protein	-
OCV49_RS02395	-	479184..479462 (+)	279	WP_017108701.1	hypothetical protein	-
OCV49_RS02400	tpx	479633..480139 (+)	507	WP_192852306.1	thiol peroxidase	-
OCV49_RS02405	-	480337..480825 (+)	489	WP_102279351.1	hypothetical protein	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37322.85 Da
• Isoelectric Point: 5.0836

>NTDB_id=92181 OCV49_RS02385 WP_029223240.1 476782..477822(+) (recA) [Vibrio lentus strain LMG 21034]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKSNSCKHLRENPEIALELDT
KLRELLLTPAVLEEKGAEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=92181 OCV49_RS02385 WP_029223240.1 476782..477822(+) (recA) [Vibrio lentus strain LMG 21034]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCGATCATGCG
TCTTGGTGATAACCGTACAATGGACGTAGAAACTATTTCTACAGGCTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCCTACCGATGGGGCGTATCGTGGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCA
GCGGCGCAAAAAGTGGGCAAAACGTGTGCATTCGTTGATGCGGAACACGCACTTGACCCTATCTACGCTCAAAAGCTTGG
TGTTGATATCGACGCTTTGCTTGTGTCTCAACCAGATACCGGTGAACAAGCTCTAGAAATCTGTGATGCACTGGCTCGTT
CAGGTGCTATCGATGTTCTTGTTATTGACTCGGTTGCTGCACTAACACCTAAAGCTGAGATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAAGCACGTATGCTTTCTCAAGCAATGCGTAAGCTAACAGGTAACCTTAAGCAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTCGGTAACCCAGAAACAACAACAGGTGGTAATGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATTCGCCGTACTGGTGCAATCAAAGATGGTGATGAAGTTGTTGGTAACGAG
ACTCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAAACTCAAATCCTTTACGGAAAAGGCTT
CAACCGCGAAGGTGAGCTTATCGATTTAGGTGTTAAGAATAAGCTAGTAGAGAAAGCGGGCGCTTGGTACAGCTACAAAG
GCGATAAGATCGGCCAAGGTAAATCGAACTCTTGTAAGCACCTACGTGAAAACCCAGAGATCGCTCTGGAACTTGACACT
AAGCTTCGTGAATTGCTACTGACTCCTGCTGTTCTTGAAGAGAAAGGCGCAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A1R3EA59

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.97	95.087	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.97	95.087	0.855
recA	Pseudomonas stutzeri DSM 10701	75.227	95.665	0.72
recA	Acinetobacter baumannii D1279779	72.174	99.711	0.72
recA	Acinetobacter baylyi ADP1	71.387	100	0.714
recA	Neisseria gonorrhoeae MS11	66.954	100	0.673
recA	Neisseria gonorrhoeae MS11	66.954	100	0.673
recA	Neisseria gonorrhoeae strain FA1090	66.954	100	0.673
recA	Glaesserella parasuis strain SC1401	67.442	99.422	0.671
recA	Ralstonia pseudosolanacearum GMI1000	71.111	91.04	0.647
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.95	92.197	0.59
recA	Streptococcus mutans UA159	58.166	100	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.775	0.581
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	95.665	0.575
recA	Helicobacter pylori strain NCTC11637	60.923	93.931	0.572
recA	Streptococcus pneumoniae TIGR4	61.3	93.353	0.572
recA	Streptococcus pneumoniae R6	61.3	93.353	0.572
recA	Streptococcus pneumoniae D39	61.3	93.353	0.572
recA	Streptococcus pneumoniae Rx1	61.3	93.353	0.572
recA	Streptococcus mitis NCTC 12261	60.991	93.353	0.569
recA	Helicobacter pylori 26695	60.615	93.931	0.569
recA	Latilactobacillus sakei subsp. sakei 23K	57.647	98.266	0.566
recA	Streptococcus mitis SK321	60.681	93.353	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.748	92.775	0.564
recA	Streptococcus pyogenes NZ131	59.385	93.931	0.558
recA	Lactococcus lactis subsp. cremoris KW2	58.204	93.353	0.543