Detailed information NTG0092139

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV24_RS02545
• Genome accession: NZ_AP025497
• Coordinates: 512609..513649 (+)
• Length: 346 a.a.
• NCBI ID: WP_017056586.1
• Uniprot ID: A0A4V5R5U9
• Organism: Vibrio kanaloae strain LMG 20539
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 507609..518649

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV24_RS02530	rpoS	508194..509174 (+)	981	WP_102508255.1	RNA polymerase sigma factor RpoS	Regulator
OCV24_RS02535	mutS	509289..511850 (-)	2562	WP_150878381.1	DNA mismatch repair protein MutS	-
OCV24_RS02540	pncC	511975..512469 (+)	495	WP_060468640.1	nicotinamide-nucleotide amidase	-
OCV24_RS02545	recA	512609..513649 (+)	1041	WP_017056586.1	recombinase RecA	Machinery gene
OCV24_RS02550	alaS	513966..516548 (+)	2583	WP_102507471.1	alanine--tRNA ligase	-
OCV24_RS02555	-	516764..517945 (+)	1182	WP_077680854.1	aspartate kinase	-
OCV24_RS02560	csrA	518038..518235 (+)	198	WP_009847619.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37342.86 Da
• Isoelectric Point: 4.9043

>NTDB_id=92139 OCV24_RS02545 WP_017056586.1 512609..513649(+) (recA) [Vibrio kanaloae strain LMG 20539]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVALEIDT
KLRELLLTPAVLEEKDVEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=92139 OCV24_RS02545 WP_017056586.1 512609..513649(+) (recA) [Vibrio kanaloae strain LMG 20539]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCGATCATGCG
TCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCCTACCGATGGGACGTATCGTAGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCACAGAAAGTAGGCAAAACGTGTGCATTCGTTGATGCGGAGCACGCACTAGACCCTATCTACGCTCAAAAGCTTGG
TGTTGATATCGATGCACTTCTTGTTTCTCAACCAGATACGGGTGAGCAAGCGCTTGAAATCTGTGATGCACTGGCTCGTT
CAGGTGCAATCGACGTTCTTGTTATTGACTCAGTAGCAGCACTAACACCAAAAGCAGAAATTGAAGGCGAAATGGGTGAC
AGCCACATGGGTCTTCAGGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTGACGGGCAACCTTAAGCAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAAATTGGTGTGATGTTCGGTAACCCAGAAACAACAACAGGTGGTAACGCAC
TTAAGTTTTACGCATCTGTTCGTCTTGATATTCGCCGTACTGGTGCGATTAAAGATGGTGATGAAGTTGTTGGTAACGAA
ACTCGTATCAAGGTCGTTAAGAACAAGATTGCTGCACCATTCAAACAAGCTGAGACTCAAATCCTTTACGGTAAAGGCTT
CAACCGCGAAGGTGAGCTTATCGATTTAGGTGTTAAGAATAAGCTAGTAGAAAAAGCGGGCGCTTGGTACAGCTACAAAG
GCGATAAGATCGGCCAAGGTAAAGCTAACGCTGGTAAATACCTACGTGAAAACCCAGAAGTTGCTCTAGAGATCGATACT
AAACTTCGTGAGTTACTACTGACTCCTGCTGTTCTTGAAGAGAAAGACGTAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A4V5R5U9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.97	95.087	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.97	95.087	0.855
recA	Pseudomonas stutzeri DSM 10701	76.133	95.665	0.728
recA	Acinetobacter baumannii D1279779	72.807	98.844	0.72
recA	Acinetobacter baylyi ADP1	71.676	100	0.717
recA	Glaesserella parasuis strain SC1401	67.045	100	0.682
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae strain FA1090	67.241	100	0.676
recA	Ralstonia pseudosolanacearum GMI1000	69.817	94.798	0.662
recA	Streptococcus mutans UA159	58.453	100	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	92.197	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.775	0.584
recA	Streptococcus pneumoniae D39	61.92	93.353	0.578
recA	Streptococcus pneumoniae TIGR4	61.92	93.353	0.578
recA	Streptococcus pneumoniae Rx1	61.92	93.353	0.578
recA	Streptococcus pneumoniae R6	61.92	93.353	0.578
recA	Streptococcus mitis SK321	61.92	93.353	0.578
recA	Helicobacter pylori strain NCTC11637	61.538	93.931	0.578
recA	Helicobacter pylori 26695	61.231	93.931	0.575
recA	Streptococcus mitis NCTC 12261	61.61	93.353	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	58.529	98.266	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.665	0.572
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.775	0.569
recA	Streptococcus pyogenes NZ131	60.308	93.931	0.566
recA	Lactococcus lactis subsp. cremoris KW2	59.443	93.353	0.555