Detailed information NTG0092013

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV50_RS12005
• Genome accession: NZ_AP025487
• Coordinates: 2754256..2755293 (-)
• Length: 345 a.a.
• NCBI ID: WP_261903149.1
• Uniprot ID: -
• Organism: Vibrio fortis strain LMG 21557
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2749256..2760293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV50_RS11990	alaS	2750050..2752632 (-)	2583	WP_239841221.1	alanine--tRNA ligase	-
OCV50_RS11995	tpx	2752900..2753406 (-)	507	WP_261903147.1	thiol peroxidase	-
OCV50_RS12000	-	2753467..2753745 (-)	279	WP_261903148.1	hypothetical protein	-
OCV50_RS12005	recA	2754256..2755293 (-)	1038	WP_261903149.1	recombinase RecA	Machinery gene
OCV50_RS12010	pncC	2755434..2755925 (-)	492	WP_239841225.1	nicotinamide-nucleotide amidase	-
OCV50_RS12015	mutS	2756047..2758608 (+)	2562	WP_261903150.1	DNA mismatch repair protein MutS	-
OCV50_RS12020	rpoS	2758692..2759672 (-)	981	WP_261903151.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37214.66 Da
• Isoelectric Point: 5.0658

>NTDB_id=92013 OCV50_RS12005 WP_261903149.1 2754256..2755293(-) (recA) [Vibrio fortis strain LMG 21557]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEIVGNE
TRIKVVKNKIAAPFKQAETQILYGQGFNREGELIDLGVKHKLIEKAGAWYSYNGDKIGQGKANAGKFLRENPEAAKTIDA
KLREMLLTPARAEEPETGEMPQEEL

Nucleotide

• Length: 1038 bp

>NTDB_id=92013 OCV50_RS12005 WP_261903149.1 2754256..2755293(-) (recA) [Vibrio fortis strain LMG 21557]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAGTTTGGTAAAGGCTCTATCATGCG
TCTTGGTGACAACCGCACAATGGATGTAGAAACCATTTCTACTGGCTCGCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCCTGCCAATGGGTCGTATCGTTGAGATCTATGGTCCAGAATCATCAGGTAAAACAACCCTAACACTAGAGCTTATCGCA
GCAGCTCAACGTGAAGGTAAAACATGTGCATTCGTCGATGCGGAGCACGCACTAGACCCTATCTATGCTCAAAAGTTGGG
TGTTGATATCGATGCGCTTCTTGTTTCTCAGCCTGATACTGGTGAGCAAGCACTAGAAATCTGTGATGCGTTAGCGCGTT
CAGGTGCGATTGATGTTCTTGTTGTCGACTCTGTAGCAGCATTGACACCGAAAGCGGAAATTGAAGGTGAGATGGGTGAT
AGCCACATGGGTCTGCAAGCGCGTATGCTTTCTCAAGCAATGCGTAAGCTAACAGGTAACCTGAAGCAATCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATCGGTGTTATGTTTGGTAACCCAGAAACAACAACGGGTGGTAACGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATCCGTCGTACTGGCTCTATCAAAGAAGGCGACGAGATTGTTGGTAACGAA
ACTCGCATTAAGGTTGTTAAGAACAAGATTGCTGCACCATTTAAGCAAGCTGAAACTCAAATTCTATACGGCCAAGGCTT
TAACCGTGAGGGTGAGCTGATCGACCTAGGTGTTAAGCATAAGCTGATTGAAAAAGCGGGTGCTTGGTACAGCTACAACG
GCGATAAGATCGGTCAAGGTAAAGCGAACGCTGGTAAGTTCCTTCGTGAGAATCCAGAAGCAGCGAAAACTATCGATGCT
AAGCTTCGTGAAATGCTACTGACTCCAGCTCGAGCTGAAGAGCCTGAAACAGGTGAAATGCCGCAAGAAGAGTTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	87.535	100	0.896
recA	Vibrio cholerae strain A1552	87.535	100	0.896
recA	Acinetobacter baylyi ADP1	72.674	99.71	0.725
recA	Pseudomonas stutzeri DSM 10701	75.305	95.072	0.716
recA	Acinetobacter baumannii D1279779	74.39	95.072	0.707
recA	Neisseria gonorrhoeae MS11	67.908	100	0.687
recA	Neisseria gonorrhoeae MS11	67.908	100	0.687
recA	Neisseria gonorrhoeae strain FA1090	67.908	100	0.687
recA	Glaesserella parasuis strain SC1401	66.289	100	0.678
recA	Ralstonia pseudosolanacearum GMI1000	71.111	91.304	0.649
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	92.464	0.586
recA	Streptococcus mutans UA159	61.231	94.203	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	61.994	93.043	0.577
recA	Streptococcus pneumoniae D39	61.61	93.623	0.577
recA	Streptococcus pneumoniae TIGR4	61.61	93.623	0.577
recA	Streptococcus pneumoniae Rx1	61.61	93.623	0.577
recA	Streptococcus pneumoniae R6	61.61	93.623	0.577
recA	Helicobacter pylori 26695	60.856	94.783	0.577
recA	Streptococcus mitis SK321	61.3	93.623	0.574
recA	Streptococcus mitis NCTC 12261	61.3	93.623	0.574
recA	Helicobacter pylori strain NCTC11637	60.55	94.783	0.574
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.517	95.942	0.571
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.942	0.571
recA	Streptococcus pyogenes NZ131	60.615	94.203	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	93.043	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.133	93.623	0.554