Detailed information NTG0091958

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV36_RS02600
• Genome accession: NZ_AP025483
• Coordinates: 532941..533978 (+)
• Length: 345 a.a.
• NCBI ID: WP_029225094.1
• Uniprot ID: A0A2R4N458
• Organism: Vibrio echinoideorum strain DSM 107264
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 527941..538978

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV36_RS02585	rpoS	528498..529478 (+)	981	WP_029225096.1	RNA polymerase sigma factor RpoS	Regulator
OCV36_RS02590	mutS	529622..532183 (-)	2562	WP_017075369.1	DNA mismatch repair protein MutS	-
OCV36_RS02595	pncC	532308..532802 (+)	495	WP_135457188.1	nicotinamide-nucleotide amidase	-
OCV36_RS02600	recA	532941..533978 (+)	1038	WP_029225094.1	recombinase RecA	Machinery gene
OCV36_RS02605	alaS	534301..536883 (+)	2583	WP_135457187.1	alanine--tRNA ligase	-
OCV36_RS02610	-	537104..538285 (+)	1182	WP_135457272.1	aspartate kinase	-
OCV36_RS02615	csrA	538378..538575 (+)	198	WP_009847619.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37182.71 Da
• Isoelectric Point: 5.1947

>NTDB_id=91958 OCV36_RS02600 WP_029225094.1 532941..533978(+) (recA) [Vibrio echinoideorum strain DSM 107264]
MDDNKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIS
AAQKVGKTCAFIDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKSNSCKHLRENPEIALELDT
KLRELLLTPAVLEEKGAEKEESEEL

Nucleotide

• Length: 1038 bp

>NTDB_id=91958 OCV36_RS02600 WP_029225094.1 532941..533978(+) (recA) [Vibrio echinoideorum strain DSM 107264]
ATGGACGATAATAAACAGAAAGCGTTAGCTGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCGATCATGCG
TCTTGGTGATAACCGTACAATGGACGTAGAAACTATTTCTACAGGTTCTCTATCTCTAGATATCGCACTGGGTGCTGGTG
GCTTACCTATGGGACGTATCGTTGAAGTTTACGGTCCAGAATCATCAGGTAAAACAACGCTAACTCTTGAGCTTATTTCC
GCAGCTCAGAAAGTGGGCAAAACGTGTGCATTCATTGATGCGGAACACGCACTTGATCCTATCTACGCTCAAAAGCTTGG
TGTTGATATCGATGCTTTGCTTGTATCTCAACCTGATACCGGTGAACAAGCTCTAGAAATCTGTGATGCACTGGCTCGTT
CAGGTGCTATCGATGTTCTTGTTATTGACTCGGTTGCTGCACTAACACCTAAAGCTGAGATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAGGCTCGTATGCTTTCTCAAGCGATGCGTAAACTGACAGGTAACCTTAAGCAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAAATTGGTGTGATGTTCGGTAATCCAGAAACAACAACCGGTGGTAATGCAC
TTAAGTTCTACGCATCTGTTCGCTTAGATATCCGTCGTACGGGTGCGATCAAAGATGGTGATGAAGTTGTTGGTAACGAG
ACTCGCATTAAGGTTGTTAAGAACAAGATTGCAGCGCCATTTAAGCAAGCTGAGACTCAAATTCTTTACGGTAAAGGCTT
CAACCGCGAAGGCGAGCTTATCGATTTAGGTGTTAAGAATAAGTTGGTAGAAAAAGCGGGCGCTTGGTACAGCTACAAAG
GCGACAAGATTGGCCAAGGTAAGTCGAACTCTTGTAAGCACCTACGTGAAAACCCAGAGATCGCTCTGGAACTTGACACT
AAGCTACGTGAATTGCTTTTGACTCCTGCCGTTCTTGAAGAAAAAGGCGCAGAGAAAGAAGAAAGCGAAGAGCTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A2R4N458

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.666	95.362	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.666	95.362	0.855
recA	Acinetobacter baylyi ADP1	72.384	99.71	0.722
recA	Acinetobacter baumannii D1279779	72.093	99.71	0.719
recA	Pseudomonas stutzeri DSM 10701	74.32	95.942	0.713
recA	Neisseria gonorrhoeae MS11	66.571	100	0.67
recA	Neisseria gonorrhoeae MS11	66.571	100	0.67
recA	Neisseria gonorrhoeae strain FA1090	66.571	100	0.67
recA	Glaesserella parasuis strain SC1401	70.37	93.913	0.661
recA	Ralstonia pseudosolanacearum GMI1000	71.111	91.304	0.649
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.87	100	0.609
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	93.043	0.583
recA	Streptococcus mutans UA159	58.14	99.71	0.58
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	95.942	0.58
recA	Streptococcus pneumoniae Rx1	61.3	93.623	0.574
recA	Streptococcus pneumoniae R6	61.3	93.623	0.574
recA	Streptococcus pneumoniae D39	61.3	93.623	0.574
recA	Streptococcus pneumoniae TIGR4	61.3	93.623	0.574
recA	Streptococcus mitis NCTC 12261	60.991	93.623	0.571
recA	Helicobacter pylori strain NCTC11637	60.615	94.203	0.571
recA	Helicobacter pylori 26695	60.308	94.203	0.568
recA	Streptococcus mitis SK321	60.681	93.623	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.129	92.464	0.565
recA	Streptococcus pyogenes NZ131	59.692	94.203	0.562
recA	Latilactobacillus sakei subsp. sakei 23K	59.813	93.043	0.557
recA	Lactococcus lactis subsp. cremoris KW2	58.204	93.623	0.545