Detailed information NTG0091880

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OC193_RS13150
• Genome accession: NZ_AP025476
• Coordinates: 2963628..2964668 (-)
• Length: 346 a.a.
• NCBI ID: WP_017056586.1
• Uniprot ID: A0A4V5R5U9
• Organism: Vibrio crassostreae strain LMG 22240
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2958628..2969668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OC193_RS13135	csrA	2959022..2959219 (-)	198	WP_004415691.1	carbon storage regulator CsrA	-
OC193_RS13140	-	2959312..2960493 (-)	1182	WP_080967413.1	aspartate kinase	-
OC193_RS13145	alaS	2960714..2963296 (-)	2583	WP_048664498.1	alanine--tRNA ligase	-
OC193_RS13150	recA	2963628..2964668 (-)	1041	WP_017056586.1	recombinase RecA	Machinery gene
OC193_RS13155	pncC	2964808..2965302 (-)	495	WP_048659431.1	nicotinamide-nucleotide amidase	-
OC193_RS13160	mutS	2965427..2967988 (+)	2562	WP_048664497.1	DNA mismatch repair protein MutS	-
OC193_RS13165	rpoS	2968122..2969102 (-)	981	WP_017059027.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37342.86 Da
• Isoelectric Point: 4.9043

>NTDB_id=91880 OC193_RS13150 WP_017056586.1 2963628..2964668(-) (recA) [Vibrio crassostreae strain LMG 22240]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYKGDKIGQGKANAGKYLRENPEVALEIDT
KLRELLLTPAVLEEKDVEKEEENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=91880 OC193_RS13150 WP_017056586.1 2963628..2964668(-) (recA) [Vibrio crassostreae strain LMG 22240]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAGCAATTTGGTAAAGGTTCTATCATGCG
TCTTGGTGATAACCGCACAATGGACGTAGAAACTATTTCTACTGGTTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GCCTACCGATGGGGCGTATCGTAGAAGTTTACGGTCCTGAATCATCAGGTAAAACAACGCTAACGCTTGAGCTTATTGCT
GCAGCACAGAAAGTAGGCAAGACGTGTGCTTTCGTTGATGCGGAACACGCACTAGACCCTATCTACGCTCAAAAGCTTGG
TGTTGATATCGATGCGCTTCTTGTTTCTCAACCTGATACGGGTGAGCAAGCGCTAGAAATCTGTGATGCACTGGCTCGTT
CAGGTGCAATCGATGTACTTGTTATTGACTCCGTAGCAGCACTAACACCAAAAGCAGAAATCGAAGGCGAAATGGGCGAC
AGCCACATGGGTCTTCAGGCTCGTATGCTTTCTCAAGCGATGCGTAAGCTGACGGGTAACCTTAAGCAGTCTAACTGTAT
GGCTATCTTCATTAACCAAATTCGTATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACAACAACAGGTGGTAACGCAC
TTAAGTTCTACGCATCTGTTCGTCTTGATATTCGCCGTACTGGTGCGATTAAAGATGGTGATGAAGTTGTTGGTAACGAA
ACTCGTATCAAGGTTGTTAAGAACAAGATTGCTGCACCATTTAAACAAGCTGAAACTCAAATCCTTTACGGTAAAGGCTT
CAACCGCGAAGGTGAGCTTATCGACTTAGGTGTTAAGAATAAGCTAGTAGAAAAAGCGGGCGCTTGGTACAGCTACAAGG
GCGATAAGATCGGCCAAGGTAAAGCTAACGCTGGTAAATACCTACGTGAAAACCCAGAAGTTGCTCTAGAGATCGATACT
AAACTTCGTGAGTTACTACTGACTCCTGCTGTTCTTGAAGAGAAAGACGTAGAGAAAGAAGAAGAAAACGAAGAGCTATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A4V5R5U9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.97	95.087	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.97	95.087	0.855
recA	Pseudomonas stutzeri DSM 10701	76.133	95.665	0.728
recA	Acinetobacter baumannii D1279779	72.807	98.844	0.72
recA	Acinetobacter baylyi ADP1	71.676	100	0.717
recA	Glaesserella parasuis strain SC1401	67.045	100	0.682
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae MS11	67.241	100	0.676
recA	Neisseria gonorrhoeae strain FA1090	67.241	100	0.676
recA	Ralstonia pseudosolanacearum GMI1000	69.817	94.798	0.662
recA	Streptococcus mutans UA159	58.453	100	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	92.197	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.775	0.584
recA	Streptococcus pneumoniae D39	61.92	93.353	0.578
recA	Streptococcus pneumoniae TIGR4	61.92	93.353	0.578
recA	Streptococcus pneumoniae Rx1	61.92	93.353	0.578
recA	Streptococcus pneumoniae R6	61.92	93.353	0.578
recA	Streptococcus mitis SK321	61.92	93.353	0.578
recA	Helicobacter pylori strain NCTC11637	61.538	93.931	0.578
recA	Helicobacter pylori 26695	61.231	93.931	0.575
recA	Streptococcus mitis NCTC 12261	61.61	93.353	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	58.529	98.266	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.819	95.665	0.572
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	92.775	0.569
recA	Streptococcus pyogenes NZ131	60.308	93.931	0.566
recA	Lactococcus lactis subsp. cremoris KW2	59.443	93.353	0.555