Detailed information NTG0091825

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV39_RS02360
• Genome accession: NZ_AP025472
• Coordinates: 486620..487660 (+)
• Length: 346 a.a.
• NCBI ID: WP_017054193.1
• Uniprot ID: A0A1E5D078
• Organism: Vibrio cortegadensis strain CECT 7227
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 481620..492660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV39_RS02345	rpoS	482178..483152 (+)	975	WP_017054196.1	RNA polymerase sigma factor RpoS	Regulator
OCV39_RS02350	mutS	483296..485857 (-)	2562	WP_261888851.1	DNA mismatch repair protein MutS	-
OCV39_RS02355	-	485942..486436 (+)	495	WP_261888852.1	CinA family protein	-
OCV39_RS02360	recA	486620..487660 (+)	1041	WP_017054193.1	recombinase RecA	Machinery gene
OCV39_RS02365	alaS	487922..490504 (+)	2583	WP_261888853.1	alanine--tRNA ligase	-
OCV39_RS02370	-	490688..491875 (+)	1188	WP_017054191.1	aspartate kinase	-
OCV39_RS02375	csrA	491965..492162 (+)	198	WP_017054190.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37262.75 Da
• Isoelectric Point: 4.9695

>NTDB_id=91825 OCV39_RS02360 WP_017054193.1 486620..487660(+) (recA) [Vibrio cortegadensis strain CECT 7227]
MDDNKKKALSAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLALDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRVGKTCAFIDAEHALDPIYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYQGDKIGQGKANSGKYLRENPEVALEIDT
KLRDLLLTPVVVEEETGTESPENEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=91825 OCV39_RS02360 WP_017054193.1 486620..487660(+) (recA) [Vibrio cortegadensis strain CECT 7227]
ATGGACGATAATAAGAAAAAGGCACTATCAGCAGCATTGGGCCAAATTGAGAAACAATTCGGTAAAGGCTCAATCATGCG
TTTAGGCGACAACCGCACAATGGACGTAGAGACAATCTCTACAGGTTCATTAGCGTTAGATATCGCTTTGGGTGCTGGTG
GTTTACCTATGGGACGTATCGTAGAAGTATACGGTCCTGAGAGTTCAGGTAAGACTACTCTAACATTAGAGCTTATCGCT
GCTGCGCAACGTGTTGGAAAAACGTGTGCATTTATCGATGCTGAACACGCTCTTGATCCTATCTATGCGAAAAAGCTAGG
TGTTGATATTGATGCATTGCTTGTTTCACAACCAGATACTGGTGAGCAAGCATTAGAGATCTGTGATGCACTTGCGCGTT
CTGGTGCAATTGATGTATTGGTTGTCGATTCTGTTGCTGCACTAACACCTAAAGCTGAAATTGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAAGCGCGTATGCTTTCTCAAGCAATGCGTAAACTAACGGGTAACTTAAAACAGTCTAACTGTAT
GTGTATCTTCATTAACCAAATTCGTATGAAGATTGGTGTTATGTTTGGTAACCCAGAAACCACAACGGGTGGTAACGCGC
TTAAATTCTACGCATCAGTTCGTCTTGATATTCGTCGTACAGGCGCAATTAAAGAAGGCGATGAAGTTGTGGGTAATGAA
ACTCGCATTAAAGTTGTTAAAAACAAGATTGCAGCACCGTTCAAACAAGCGGAAACTCAAATTCTTTACGGAAAAGGTTT
TAACCGTGAAGGTGAGCTGATTGATTTAGGTGTTAAAAATAAATTAGTTGAGAAAGCGGGTGCATGGTACAGCTACCAAG
GTGATAAAATTGGCCAAGGTAAAGCGAATTCGGGTAAGTACTTACGTGAGAACCCAGAAGTTGCACTTGAAATCGATACT
AAACTACGAGATCTACTGTTAACACCAGTTGTCGTGGAAGAAGAGACAGGGACTGAGTCACCTGAAAATGAAGAGTTATA
G

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A1E5D078

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.97	95.087	0.855
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.97	95.087	0.855
recA	Acinetobacter baylyi ADP1	72.254	100	0.723
recA	Pseudomonas stutzeri DSM 10701	75.915	94.798	0.72
recA	Acinetobacter baumannii D1279779	75	94.798	0.711
recA	Neisseria gonorrhoeae MS11	67.147	100	0.673
recA	Neisseria gonorrhoeae MS11	67.147	100	0.673
recA	Neisseria gonorrhoeae strain FA1090	67.147	100	0.673
recA	Glaesserella parasuis strain SC1401	68.142	97.977	0.668
recA	Ralstonia pseudosolanacearum GMI1000	67.941	98.266	0.668
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.983	100	0.61
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	92.775	0.578
recA	Helicobacter pylori strain NCTC11637	61.538	93.931	0.578
recA	Helicobacter pylori 26695	61.231	93.931	0.575
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	95.665	0.575
recA	Streptococcus pneumoniae D39	61.61	93.353	0.575
recA	Streptococcus pneumoniae TIGR4	61.61	93.353	0.575
recA	Streptococcus mitis SK321	61.61	93.353	0.575
recA	Streptococcus pneumoniae R6	61.61	93.353	0.575
recA	Streptococcus pneumoniae Rx1	61.61	93.353	0.575
recA	Latilactobacillus sakei subsp. sakei 23K	58.529	98.266	0.575
recA	Streptococcus mutans UA159	60.923	93.931	0.572
recA	Streptococcus mitis NCTC 12261	61.3	93.353	0.572
recA	Streptococcus pyogenes NZ131	60.615	93.931	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.442	92.197	0.566
recA	Lactococcus lactis subsp. cremoris KW2	59.133	93.353	0.552