Detailed information NTG0091744

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV52_RS13180
• Genome accession: NZ_AP025465
• Coordinates: 2888633..2889673 (-)
• Length: 346 a.a.
• NCBI ID: WP_004739060.1
• Uniprot ID: A0A2S7VH91
• Organism: Vibrio chagasii strain LMG 21353
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2883633..2894673

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV52_RS13160	-	2885729..2886217 (-)	489	WP_137408060.1	hypothetical protein	-
OCV52_RS13165	tpx	2886400..2886906 (-)	507	WP_137408059.1	thiol peroxidase	-
OCV52_RS13170	-	2887071..2887349 (-)	279	WP_137408058.1	hypothetical protein	-
OCV52_RS13175	-	2887589..2888467 (+)	879	WP_233090232.1	winged helix-turn-helix domain-containing protein	-
OCV52_RS13180	recA	2888633..2889673 (-)	1041	WP_004739060.1	recombinase RecA	Machinery gene
OCV52_RS13185	pncC	2889815..2890309 (-)	495	WP_137408056.1	nicotinamide-nucleotide amidase	-
OCV52_RS13190	mutS	2890434..2892995 (+)	2562	WP_137408055.1	DNA mismatch repair protein MutS	-
OCV52_RS13195	rpoS	2893082..2894062 (-)	981	WP_150897807.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37515.04 Da
• Isoelectric Point: 4.8285

>NTDB_id=91744 OCV52_RS13180 WP_004739060.1 2888633..2889673(-) (recA) [Vibrio chagasii strain LMG 21353]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQKVGKTCAFVDAEHALDPIYAQKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEIVGNE
TRIKVVKNKIAAPFKQAETQILYGQGFNREGELIDLGVKNKLVDKAGAWYSYKGDKIGQGKSNSCKFLRENPEIALELDT
KLRELLLTPAVLDEKEVEKEEENEEF

Nucleotide

• Length: 1041 bp

>NTDB_id=91744 OCV52_RS13180 WP_004739060.1 2888633..2889673(-) (recA) [Vibrio chagasii strain LMG 21353]
ATGGACGAGAATAAACAAAAAGCGTTAGCCGCAGCCCTTGGTCAGATTGAAAAACAATTTGGTAAAGGCTCTATCATGCG
TCTTGGTGACAACCGTACAATGGATGTAGAAACGATTTCTACTGGTTCTCTATCTCTAGATATCGCACTAGGTGCTGGTG
GTCTACCGATGGGTCGTATCGTTGAAATCTACGGTCCAGAATCTTCAGGTAAAACAACGCTAACACTTGAGCTGATCGCT
GCAGCACAAAAAGTAGGTAAAACCTGTGCTTTCGTTGATGCTGAGCACGCACTAGACCCTATTTACGCTCAAAAGCTTGG
TGTTGATATCGATGCACTTCTTGTTTCTCAACCGGATACTGGTGAACAAGCTCTAGAAATTTGTGATGCTCTAGCGCGTT
CTGGTGCTATCGACGTATTGGTTGTCGATTCAGTAGCAGCACTAACACCAAAAGCTGAAATCGAAGGCGAAATGGGTGAC
AGCCACATGGGTCTTCAAGCTCGTATGCTTTCTCAGGCAATGCGTAAGCTGACTGGTAACCTTAAGCAGTCTAACTGTAT
GTGTATCTTCATTAACCAAATCCGTATGAAGATTGGTGTAATGTTTGGTAACCCAGAAACAACAACGGGTGGTAACGCAC
TTAAGTTCTACGCATCGGTTCGTCTTGATATTCGTCGTACTGGTTCTATCAAAGAAGGTGACGAGATCGTTGGTAACGAA
ACGCGCATTAAGGTTGTTAAGAACAAGATTGCTGCACCGTTTAAACAAGCTGAAACTCAAATCTTATACGGCCAGGGTTT
TAACCGCGAAGGTGAGCTGATTGACCTAGGTGTTAAGAACAAGTTAGTTGATAAAGCTGGCGCTTGGTACAGCTACAAAG
GCGATAAGATCGGTCAAGGTAAATCGAACTCTTGTAAGTTCCTACGTGAAAACCCAGAGATCGCTCTAGAGCTAGATACT
AAACTTCGTGAACTACTACTGACTCCTGCTGTTCTTGACGAGAAAGAAGTAGAAAAAGAAGAAGAGAACGAAGAGTTTTA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A2S7VH91

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.578	95.087	0.861
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.578	95.087	0.861
recA	Acinetobacter baumannii D1279779	73.392	98.844	0.725
recA	Acinetobacter baylyi ADP1	72.965	99.422	0.725
recA	Pseudomonas stutzeri DSM 10701	74.924	95.665	0.717
recA	Glaesserella parasuis strain SC1401	67.898	100	0.691
recA	Neisseria gonorrhoeae MS11	67.816	100	0.682
recA	Neisseria gonorrhoeae MS11	67.816	100	0.682
recA	Neisseria gonorrhoeae strain FA1090	67.816	100	0.682
recA	Ralstonia pseudosolanacearum GMI1000	69.817	94.798	0.662
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.516	99.133	0.61
recA	Streptococcus pneumoniae TIGR4	59.593	99.422	0.592
recA	Streptococcus pneumoniae R6	59.593	99.422	0.592
recA	Streptococcus pneumoniae D39	59.593	99.422	0.592
recA	Streptococcus pneumoniae Rx1	59.593	99.422	0.592
recA	Streptococcus mutans UA159	58.453	100	0.59
recA	Helicobacter pylori 26695	61.846	93.931	0.581
recA	Streptococcus mitis NCTC 12261	58.43	99.422	0.581
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	92.775	0.578
recA	Helicobacter pylori strain NCTC11637	61.538	93.931	0.578
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	95.665	0.575
recA	Streptococcus mitis SK321	60.991	93.353	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.748	92.775	0.564
recA	Streptococcus pyogenes NZ131	59.692	93.931	0.561
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	92.775	0.558
recA	Lactococcus lactis subsp. cremoris KW2	56.973	97.399	0.555