Detailed information NTG0089397

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU34_RS02565
• Genome accession: NZ_AP024911
• Coordinates: 536711..537754 (+)
• Length: 347 a.a.
• NCBI ID: WP_123017295.1
• Uniprot ID: -
• Organism: Vibrio zhugei strain KCTC 62784
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 531711..542754

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU34_RS02550	rpoS	532370..533344 (+)	975	WP_123015387.1	RNA polymerase sigma factor RpoS	Regulator
OCU34_RS02555	mutS	533421..535982 (-)	2562	WP_123015388.1	DNA mismatch repair protein MutS	-
OCU34_RS02560	pncC	536067..536561 (+)	495	WP_123017294.1	nicotinamide-nucleotide amidase	-
OCU34_RS02565	recA	536711..537754 (+)	1044	WP_123017295.1	recombinase RecA	Machinery gene
OCU34_RS02570	recX	537826..538287 (+)	462	WP_123015389.1	recombination regulator RecX	-
OCU34_RS02575	alaS	538545..541127 (+)	2583	WP_123015390.1	alanine--tRNA ligase	-
OCU34_RS02580	-	541318..542496 (+)	1179	WP_123015391.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37255.65 Da
• Isoelectric Point: 5.3175

>NTDB_id=89397 OCU34_RS02565 WP_123017295.1 536711..537754(+) (recA) [Vibrio zhugei strain KCTC 62784]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRAGKTCAFIDAEHALDPVYAGKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKASNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFREAHTQILYGQGFNREGELVDLGVKHKLVEKAGAWYSYNGDKIGQGKANACKYLREHPEVGTTIDT
TLRDMLLNPVKPAEEAEFGAVPEQEEK

Nucleotide

• Length: 1044 bp

>NTDB_id=89397 OCU34_RS02565 WP_123017295.1 536711..537754(+) (recA) [Vibrio zhugei strain KCTC 62784]
ATGGACGAAAATAAACAAAAAGCGCTGGCCGCAGCACTTGGCCAAATTGAAAAGCAATTCGGTAAAGGTTCTATCATGCG
CTTAGGTGATAACCGCGCGATGGATGTTGAAACCATTTCTACCGGGTCGCTTTCTCTAGACATCGCGCTAGGTGCGGGTG
GGCTACCAATGGGACGTATTGTGGAAGTTTACGGTCCTGAATCCTCGGGTAAAACAACATTAACTCTAGAACTGATTGCG
GCCGCTCAGCGTGCCGGTAAGACCTGTGCCTTTATTGATGCCGAGCATGCGCTTGATCCTGTATACGCAGGTAAATTGGG
TGTCAACATCGATGAGCTATTGGTATCGCAACCGGATACGGGTGAACAAGCACTAGAAATCTGTGATGCGTTGGCTCGTT
CAGGCGCGGTCGATGTAATGGTTGTCGACTCTGTTGCTGCCTTAACTCCGAAAGCGGAAATCGAAGGTGAAATGGGCGAT
AGCCACATGGGCCTACAAGCTCGTATGTTGTCACAAGCGATGCGTAAACTGACCGGTAACCTGAAAGCCTCTAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAAATTGGTGTGATGTTTGGTAACCCAGAAACCACAACAGGTGGTAATGCTC
TGAAATTCTATGCGTCTGTGCGTTTAGATATTCGTCGTACTGGTGCAATTAAAGATGGCGATGAAGTGGTGGGTAACGAA
ACTCGCATCAAAGTGGTGAAGAACAAAATTGCCGCGCCATTTAGAGAAGCTCATACACAAATCTTATACGGACAAGGCTT
TAACCGCGAAGGTGAGTTGGTTGACCTTGGCGTGAAACATAAGCTCGTAGAAAAAGCGGGTGCATGGTACAGCTACAATG
GCGATAAGATTGGTCAAGGTAAAGCGAACGCATGTAAGTATCTGCGTGAGCATCCAGAGGTTGGAACCACAATTGATACG
ACCTTGCGTGATATGCTACTTAATCCGGTAAAACCTGCGGAAGAAGCGGAGTTCGGTGCGGTACCAGAGCAAGAAGAAAA
ATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	88.952	100	0.905
recA	Vibrio cholerae O1 biovar El Tor strain E7946	88.952	100	0.905
recA	Pseudomonas stutzeri DSM 10701	76.147	94.236	0.718
recA	Acinetobacter baylyi ADP1	74.312	94.236	0.7
recA	Acinetobacter baumannii D1279779	73.089	94.236	0.689
recA	Glaesserella parasuis strain SC1401	71.341	94.524	0.674
recA	Ralstonia pseudosolanacearum GMI1000	69.018	93.948	0.648
recA	Neisseria gonorrhoeae MS11	68.519	93.372	0.64
recA	Neisseria gonorrhoeae MS11	68.519	93.372	0.64
recA	Neisseria gonorrhoeae strain FA1090	68.519	93.372	0.64
recA	Streptococcus pneumoniae D39	62.539	93.084	0.582
recA	Streptococcus pneumoniae TIGR4	62.539	93.084	0.582
recA	Streptococcus pneumoniae Rx1	62.539	93.084	0.582
recA	Streptococcus pneumoniae R6	62.539	93.084	0.582
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	92.507	0.582
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.468	94.236	0.579
recA	Streptococcus mitis SK321	61.92	93.084	0.576
recA	Helicobacter pylori strain NCTC11637	57.971	99.424	0.576
recA	Streptococcus mutans UA159	61.231	93.66	0.573
recA	Streptococcus mitis NCTC 12261	61.61	93.084	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.303	95.101	0.573
recA	Helicobacter pylori 26695	57.681	99.424	0.573
recA	Streptococcus pyogenes NZ131	60.923	93.66	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	60.436	92.507	0.559
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.61	95.389	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.443	93.084	0.553