Detailed information NTG0089286

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU56_RS10575
• Genome accession: NZ_AP024900
• Coordinates: 2330869..2331906 (-)
• Length: 345 a.a.
• NCBI ID: WP_390904838.1
• Uniprot ID: -
• Organism: Vibrio rarus strain LMG 23674
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2325869..2336906

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU56_RS10560	-	2327005..2327389 (+)	385	Protein_2051	transposase	-
OCU56_RS10565	alaS	2327537..2330128 (-)	2592	WP_261873181.1	alanine--tRNA ligase	-
OCU56_RS10570	recX	2330289..2330759 (-)	471	WP_261873182.1	recombination regulator RecX	-
OCU56_RS10575	recA	2330869..2331906 (-)	1038	WP_390904838.1	recombinase RecA	Machinery gene
OCU56_RS10580	pncC	2332000..2332494 (-)	495	WP_261873184.1	nicotinamide-nucleotide amidase	-
OCU56_RS10585	mutS	2332577..2335144 (+)	2568	WP_261873185.1	DNA mismatch repair protein MutS	-
OCU56_RS10590	rpoS	2335204..2336181 (-)	978	WP_261873186.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37171.56 Da
• Isoelectric Point: 5.5299

>NTDB_id=89286 OCU56_RS10575 WP_390904838.1 2330869..2331906(-) (recA) [Vibrio rarus strain LMG 23674]
MEHKMDDNKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTL
ELIASAQREGKTCAFIDAEHALDPIYAQKLGVNIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEG
EMGDSHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEV
VGNETRIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKHKLIEKAGAWYSYNGDKIGQGKANAGKFLRQNPEAAQ
AIDSKLREMLLTPAKAEDAQETEVE

Nucleotide

• Length: 1038 bp

>NTDB_id=89286 OCU56_RS10575 WP_390904838.1 2330869..2331906(-) (recA) [Vibrio rarus strain LMG 23674]
ATGGAGCATAAAATGGACGATAACAAGCAAAAAGCGCTGGCGGCGGCACTTGGTCAAATAGAAAAGCAATTCGGTAAAGG
TTCAATCATGCGCCTTGGTGATAACCGCACCATGGACGTAGAAACTATTTCTACCGGCTCGCTATCTCTAGATATCGCTC
TAGGTGCTGGTGGTTTGCCTATGGGTCGTATAGTCGAAGTCTATGGTCCTGAATCATCAGGTAAGACAACGCTGACTCTA
GAGCTGATTGCATCAGCACAACGTGAAGGTAAAACTTGTGCTTTCATCGATGCGGAACACGCACTAGACCCAATTTACGC
ACAAAAACTGGGCGTAAACATTGATGCTCTACTCGTTTCTCAACCAGATACTGGTGAGCAAGCGTTGGAAATTTGTGATG
CATTAGCTCGTTCTGGTGCGATTGATGTATTGGTTGTTGACTCCGTTGCAGCATTGACACCGAAAGCGGAAATTGAAGGT
GAGATGGGTGACAGTCATATGGGGCTTCAAGCTCGTATGCTAAGCCAAGCAATGCGTAAGCTAACAGGTAACTTGAAGCA
ATCGAATTGTATGGCGATCTTCATTAACCAAATTCGTATGAAAATTGGCGTGATGTTTGGCAACCCAGAAACCACTACGG
GTGGTAATGCTCTTAAATTCTACGCATCGGTTCGTTTAGATATCCGTCGTACTGGCGCGATTAAAGATGGCGATGAAGTG
GTGGGTAACGAAACGCGCATCAAGGTAGTGAAAAACAAAATTGCCGCGCCGTTTAAACAAGCAGAAACTCAAATCATGTA
CGGTCAAGGCTTCAACCGTGAAGGTGAGCTTATTGACTTGGGTGTTAAGCATAAGTTGATTGAAAAAGCGGGTGCTTGGT
ATAGCTACAATGGCGATAAAATTGGTCAAGGTAAAGCTAATGCGGGTAAATTCCTGCGTCAAAACCCTGAAGCCGCACAA
GCTATTGATAGCAAACTTCGTGAAATGCTACTGACTCCAGCTAAAGCTGAAGATGCTCAAGAAACTGAAGTAGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (11-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.645	97.971	0.878
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.645	97.971	0.878
recA	Pseudomonas stutzeri DSM 10701	74.39	95.072	0.707
recA	Acinetobacter baylyi ADP1	71.261	98.841	0.704
recA	Acinetobacter baumannii D1279779	72.561	95.072	0.69
recA	Glaesserella parasuis strain SC1401	70.679	93.913	0.664
recA	Neisseria gonorrhoeae MS11	69.018	94.493	0.652
recA	Neisseria gonorrhoeae MS11	69.018	94.493	0.652
recA	Neisseria gonorrhoeae strain FA1090	69.018	94.493	0.652
recA	Ralstonia pseudosolanacearum GMI1000	70.126	92.174	0.646
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.95	92.464	0.591
recA	Bacillus subtilis subsp. subtilis str. 168	63.551	93.043	0.591
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.145	96.232	0.588
recA	Streptococcus mutans UA159	61.89	95.072	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	59.412	98.551	0.586
recA	Streptococcus pneumoniae R6	61.027	95.942	0.586
recA	Streptococcus pneumoniae TIGR4	61.027	95.942	0.586
recA	Streptococcus mitis SK321	61.027	95.942	0.586
recA	Streptococcus mitis NCTC 12261	61.027	95.942	0.586
recA	Streptococcus pneumoniae Rx1	61.027	95.942	0.586
recA	Streptococcus pneumoniae D39	61.027	95.942	0.586
recA	Streptococcus pyogenes NZ131	61.585	95.072	0.586
recA	Helicobacter pylori strain NCTC11637	58.261	100	0.583
recA	Helicobacter pylori 26695	57.971	100	0.58
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.755	92.464	0.571
recA	Lactococcus lactis subsp. cremoris KW2	59.133	93.623	0.554