Detailed information NTG0089246

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCV11_RS02650
• Genome accession: NZ_AP024895
• Coordinates: 563198..564265 (+)
• Length: 355 a.a.
• NCBI ID: WP_261894837.1
• Uniprot ID: -
• Organism: Vibrio porteresiae DSM 19223 strain MSSRF30
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 558198..569265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV11_RS02635	rpoS	558831..559841 (+)	1011	WP_261894834.1	RNA polymerase sigma factor RpoS	Regulator
OCV11_RS02640	mutS	559907..562471 (-)	2565	WP_261894835.1	DNA mismatch repair protein MutS	-
OCV11_RS02645	pncC	562556..563041 (+)	486	WP_261894836.1	nicotinamide-nucleotide amidase	-
OCV11_RS02650	recA	563198..564265 (+)	1068	WP_261894837.1	recombinase RecA	Machinery gene
OCV11_RS02655	recX	564329..564793 (+)	465	WP_261894838.1	recombination regulator RecX	-
OCV11_RS02660	-	564880..565881 (-)	1002	WP_261894839.1	hypothetical protein	-
OCV11_RS02665	-	566169..566321 (-)	153	WP_261894840.1	hypothetical protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38375.79 Da
• Isoelectric Point: 4.9796

>NTDB_id=89246 OCV11_RS02650 WP_261894837.1 563198..564265(+) (recA) [Vibrio porteresiae DSM 19223 strain MSSRF30]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPIYARKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKASNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNRQGELIDLGVKHKLVEKSGAWYSYNGDKIGQGKANACKYLKENPEVAKVLDT
KLRELLLNPAEHAEHGETSVENDDDFSAVPEQDEL

Nucleotide

• Length: 1068 bp

>NTDB_id=89246 OCV11_RS02650 WP_261894837.1 563198..564265(+) (recA) [Vibrio porteresiae DSM 19223 strain MSSRF30]
ATGGACGAAAATAAACAGAAGGCTCTCGCAGCAGCCCTAGGTCAAATTGAGAAACAATTCGGTAAAGGTTCCATTATGCG
CCTTGGTGACAACCGCACAATGGATGTAGAAACGATCTCTACAGGTTCTCTCTCTCTAGACATCGCTTTAGGTGCTGGTG
GTTTACCGATGGGCCGTATCGTTGAAATTTATGGTCCAGAATCGTCAGGTAAAACAACACTGACTCTAGAACTGATTGCT
GCAGCGCAACGTGAAGGTAAAACCTGTGCGTTTATCGATGCAGAACACGCTCTTGACCCTATCTACGCTCGTAAATTGGG
TGTAAACATCGATGAACTTCTTGTTTCTCAGCCAGATACTGGTGAGCAAGCTCTTGAAATTTGTGACGCTTTGGCTCGCT
CAGGCGCAGTGGATGTTATGGTTGTCGACTCAGTTGCTGCGTTGACTCCTAAAGCAGAAATTGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTGCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTAACTGGTAACCTAAAAGCATCTAACTGTAT
GTGTATCTTCATCAACCAAATCCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACCACAACTGGTGGTAACGCTC
TGAAATTCTACGCTTCTGTTCGTCTTGATATTCGTCGTACTGGCGCAATCAAAGAGGGTGACGAAGTGGTTGGCAACGAA
ACTCGTATCAAAGTTGTGAAGAACAAAATTGCTGCGCCGTTTAAAGAAGCTAACACTCAGATCATGTATGGCCAAGGTTT
TAACCGTCAAGGTGAACTGATTGACCTAGGTGTAAAACACAAATTGGTCGAAAAATCAGGTGCTTGGTATAGCTACAATG
GCGACAAAATTGGTCAAGGTAAAGCGAACGCTTGTAAGTATCTGAAAGAAAATCCAGAAGTTGCAAAAGTTCTTGATACC
AAATTACGTGAGCTATTGTTGAACCCAGCAGAGCACGCTGAGCATGGTGAAACTAGCGTAGAGAATGACGACGATTTTAG
CGCAGTTCCAGAGCAAGATGAGCTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	92.351	99.437	0.918
recA	Vibrio cholerae O1 biovar El Tor strain E7946	92.351	99.437	0.918
recA	Pseudomonas stutzeri DSM 10701	76.147	92.113	0.701
recA	Acinetobacter baylyi ADP1	71.884	97.183	0.699
recA	Acinetobacter baumannii D1279779	70.725	97.183	0.687
recA	Glaesserella parasuis strain SC1401	70.175	96.338	0.676
recA	Neisseria gonorrhoeae MS11	69.018	91.831	0.634
recA	Neisseria gonorrhoeae MS11	69.018	91.831	0.634
recA	Neisseria gonorrhoeae strain FA1090	69.018	91.831	0.634
recA	Ralstonia pseudosolanacearum GMI1000	71.383	87.606	0.625
recA	Streptococcus mutans UA159	58.689	98.873	0.58
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.747	93.521	0.577
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.557	89.014	0.575
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	90.423	0.572
recA	Streptococcus pneumoniae D39	62.848	90.986	0.572
recA	Streptococcus pneumoniae TIGR4	62.848	90.986	0.572
recA	Streptococcus pneumoniae Rx1	62.848	90.986	0.572
recA	Streptococcus pneumoniae R6	62.848	90.986	0.572
recA	Streptococcus mitis SK321	62.848	90.986	0.572
recA	Streptococcus mitis NCTC 12261	62.539	90.986	0.569
recA	Helicobacter pylori strain NCTC11637	61.538	91.549	0.563
recA	Helicobacter pylori 26695	61.231	91.549	0.561
recA	Streptococcus pyogenes NZ131	61.231	91.549	0.561
recA	Lactococcus lactis subsp. cremoris KW2	61.3	90.986	0.558
recA	Latilactobacillus sakei subsp. sakei 23K	61.371	90.423	0.555
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.62	88.169	0.552