Detailed information NTG0089136

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU30_RS02270
• Genome accession: NZ_AP024887
• Coordinates: 463293..464336 (+)
• Length: 347 a.a.
• NCBI ID: WP_077315410.1
• Uniprot ID: -
• Organism: Vibrio palustris strain CECT 9027
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 458293..469336

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU30_RS02255	rpoS	458927..459904 (+)	978	WP_077315407.1	RNA polymerase sigma factor RpoS	Regulator
OCU30_RS02260	mutS	460004..462565 (-)	2562	WP_077315408.1	DNA mismatch repair protein MutS	-
OCU30_RS02265	pncC	462620..463144 (+)	525	WP_077315409.1	nicotinamide-nucleotide amidase	-
OCU30_RS02270	recA	463293..464336 (+)	1044	WP_077315410.1	recombinase RecA	Machinery gene
OCU30_RS02275	recX	464409..464870 (+)	462	WP_077315411.1	recombination regulator RecX	-
OCU30_RS02280	alaS	465117..467699 (+)	2583	WP_077315412.1	alanine--tRNA ligase	-
OCU30_RS02285	-	467894..469072 (+)	1179	WP_077315413.1	aspartate kinase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37315.79 Da
• Isoelectric Point: 5.5213

>NTDB_id=89136 OCU30_RS02270 WP_077315410.1 463293..464336(+) (recA) [Vibrio palustris strain CECT 9027]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRVGKTCAFIDAEHALDPIYAGKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVMVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKASNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFREAHTQILYGQGFNREGELVDLGVKHKLVEKAGAWYSYNGDKIGQGKANACKYLREHTEVGTTIDS
TLREMLLNPVKPAEEAEFGAVPEKEEK

Nucleotide

• Length: 1044 bp

>NTDB_id=89136 OCU30_RS02270 WP_077315410.1 463293..464336(+) (recA) [Vibrio palustris strain CECT 9027]
ATGGACGAAAATAAACAAAAAGCGCTGGCCGCAGCACTTGGCCAAATTGAAAAGCAATTCGGTAAAGGTTCTATCATGCG
CTTAGGTGACAACCGCGCAATGGATGTAGAAACCATTTCAACGGGGTCGCTTTCTCTAGATATCGCATTGGGTGCTGGTG
GCTTGCCAATGGGACGTATCGTTGAAGTATATGGTCCAGAATCATCAGGTAAAACAACGTTAACGCTTGAACTTATCGCG
GCAGCACAACGTGTCGGTAAAACCTGTGCGTTTATTGATGCTGAGCACGCTTTGGATCCTATCTACGCTGGTAAATTAGG
CGTTAATATTGATGAGCTTTTAGTCTCTCAGCCTGATACTGGTGAACAGGCACTAGAAATTTGTGATGCATTAGCTCGCT
CAGGTGCGGTTGATGTGATGGTTATTGACTCGGTTGCCGCTTTGACTCCGAAAGCAGAAATTGAAGGTGAAATGGGCGAT
AGCCACATGGGTCTTCAAGCGCGTATGCTCTCTCAAGCAATGCGTAAGCTAACGGGTAACCTGAAAGCCTCTAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAAATTGGTGTTATGTTCGGTAACCCAGAAACGACCACAGGCGGTAATGCAC
TGAAGTTTTATGCGTCAGTTCGTTTGGATATTCGTCGTACTGGTGCTATCAAAGACGGTGATGAAGTTGTCGGTAACGAA
ACACGCATCAAAGTGGTGAAAAACAAAATTGCCGCACCATTTAGAGAAGCACATACGCAAATCTTGTATGGACAAGGCTT
CAACCGTGAAGGTGAATTGGTTGACCTAGGCGTTAAACATAAGTTGGTTGAAAAAGCAGGTGCATGGTATAGCTACAATG
GCGATAAAATTGGCCAAGGTAAAGCGAATGCATGTAAGTACTTACGTGAGCATACTGAAGTAGGGACGACTATCGATTCA
ACTCTGCGCGAAATGTTGCTAAACCCAGTTAAGCCTGCCGAAGAAGCTGAGTTTGGCGCGGTACCAGAGAAAGAAGAAAA
GTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	88.385	100	0.899
recA	Vibrio cholerae strain A1552	88.385	100	0.899
recA	Pseudomonas stutzeri DSM 10701	75.535	94.236	0.712
recA	Acinetobacter baylyi ADP1	73.7	94.236	0.695
recA	Acinetobacter baumannii D1279779	73.089	94.236	0.689
recA	Glaesserella parasuis strain SC1401	70.427	94.524	0.666
recA	Ralstonia pseudosolanacearum GMI1000	69.632	93.948	0.654
recA	Neisseria gonorrhoeae MS11	67.178	93.948	0.631
recA	Neisseria gonorrhoeae MS11	67.178	93.948	0.631
recA	Neisseria gonorrhoeae strain FA1090	67.178	93.948	0.631
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.507	0.579
recA	Streptococcus pneumoniae D39	61.92	93.084	0.576
recA	Streptococcus pneumoniae TIGR4	61.92	93.084	0.576
recA	Streptococcus pneumoniae Rx1	61.92	93.084	0.576
recA	Streptococcus pneumoniae R6	61.92	93.084	0.576
recA	Helicobacter pylori strain NCTC11637	57.971	99.424	0.576
recA	Helicobacter pylori 26695	57.681	99.424	0.573
recA	Streptococcus mitis SK321	61.3	93.084	0.571
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.55	94.236	0.571
recA	Streptococcus mitis NCTC 12261	60.991	93.084	0.568
recA	Streptococcus mutans UA159	60.615	93.66	0.568
recA	Streptococcus pyogenes NZ131	60.308	93.66	0.565
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.61	95.389	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.752	93.084	0.556
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.661	90.202	0.556
recA	Latilactobacillus sakei subsp. sakei 23K	61.538	89.914	0.553