Detailed information NTG0089113

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU38_RS10430
• Genome accession: NZ_AP024885
• Coordinates: 2256829..2257869 (-)
• Length: 346 a.a.
• NCBI ID: WP_174371941.1
• Uniprot ID: -
• Organism: Vibrio neonatus strain JCM 21521
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2251829..2262869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU38_RS10410	csrA	2251892..2252089 (-)	198	WP_021712262.1	carbon storage regulator CsrA	-
OCU38_RS10415	-	2252167..2253339 (-)	1173	WP_261823019.1	aspartate kinase	-
OCU38_RS10420	alaS	2253492..2256083 (-)	2592	WP_261823020.1	alanine--tRNA ligase	-
OCU38_RS10425	recX	2256247..2256714 (-)	468	WP_261823021.1	recombination regulator RecX	-
OCU38_RS10430	recA	2256829..2257869 (-)	1041	WP_174371941.1	recombinase RecA	Machinery gene
OCU38_RS10435	pncC	2257963..2258457 (-)	495	WP_261823022.1	nicotinamide-nucleotide amidase	-
OCU38_RS10440	mutS	2258540..2261107 (+)	2568	WP_261823023.1	DNA mismatch repair protein MutS	-
OCU38_RS10445	rpoS	2261249..2262223 (-)	975	WP_261823024.1	RNA polymerase sigma factor RpoS	Regulator

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37222.62 Da
• Isoelectric Point: 5.0580

>NTDB_id=89113 OCU38_RS10430 WP_174371941.1 2256829..2257869(-) (recA) [Vibrio neonatus strain JCM 21521]
MEHKMDDNKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLALDIALGAGGLPMGRIVEVYGPESSGKTTLTL
ELIAAAQREGKTCAFIDAEHALDPIYAQKLGVNIDSLLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEG
EMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEI
VGNETRIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKHKLIEKAGAWYSYNGDKIGQGKANAGKFLRENPEAAT
AIDAKLREMLLTVATAEEETEATEAE

Nucleotide

• Length: 1041 bp

>NTDB_id=89113 OCU38_RS10430 WP_174371941.1 2256829..2257869(-) (recA) [Vibrio neonatus strain JCM 21521]
ATGGAGCATAAAATGGACGATAATAAACAAAAAGCGCTCGCAGCGGCACTTGGTCAAATTGAAAAGCAATTCGGTAAAGG
CTCTATCATGCGCCTTGGTGATAACCGCACCATGGACGTGGAAACTATCTCTACAGGTTCACTAGCATTAGATATCGCAC
TGGGTGCGGGTGGCCTACCTATGGGACGTATCGTAGAAGTTTACGGCCCAGAATCTTCAGGTAAAACAACTCTAACTCTT
GAGCTTATTGCCGCGGCGCAACGTGAAGGCAAAACTTGTGCATTCATCGATGCCGAGCACGCTCTTGACCCTATCTACGC
ACAAAAATTGGGCGTAAATATCGATTCTCTATTAGTTTCGCAACCAGATACTGGTGAACAAGCTCTTGAGATTTGTGATG
CTCTAGCACGCTCTGGTGCTATTGACGTCTTGGTTGTCGATTCTGTTGCTGCACTAACACCAAAAGCTGAAATTGAAGGC
GAAATGGGTGATAGCCACATGGGTCTGCAAGCACGTATGCTTTCTCAAGCAATGCGTAAGCTAACCGGTAACCTAAAACA
GTCTAACTGTATGTGTATCTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAATCCAGAAACTACTACTG
GTGGTAACGCACTTAAGTTTTACGCTTCTGTTCGTCTAGATATTCGTCGTACTGGCGCAATCAAAGATGGCGATGAGATT
GTGGGTAACGAAACTCGCATTAAAGTAGTTAAAAACAAAATTGCAGCACCATTTAAGCAAGCTGAAACCCAGATCATGTA
CGGTCAAGGCTTTAACCGTGAAGGTGAGCTGATCGACTTAGGCGTTAAGCATAAGCTAATCGAAAAAGCGGGTGCTTGGT
ATAGCTACAATGGCGATAAGATTGGTCAAGGTAAAGCGAACGCGGGTAAATTCCTACGTGAAAACCCAGAAGCAGCAACG
GCTATCGATGCTAAACTTCGTGAAATGCTTCTAACAGTGGCTACTGCTGAAGAAGAAACTGAAGCGACCGAAGCCGAATA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (11-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	91.768	94.798	0.87
recA	Vibrio cholerae strain A1552	91.768	94.798	0.87
recA	Acinetobacter baylyi ADP1	72.727	98.555	0.717
recA	Pseudomonas stutzeri DSM 10701	72.353	98.266	0.711
recA	Acinetobacter baumannii D1279779	72.81	95.665	0.697
recA	Glaesserella parasuis strain SC1401	67.919	100	0.679
recA	Neisseria gonorrhoeae MS11	67.941	98.266	0.668
recA	Neisseria gonorrhoeae MS11	67.941	98.266	0.668
recA	Neisseria gonorrhoeae strain FA1090	67.941	98.266	0.668
recA	Ralstonia pseudosolanacearum GMI1000	70.74	89.884	0.636
recA	Streptococcus mutans UA159	59.599	100	0.601
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.263	92.197	0.592
recA	Bacillus subtilis subsp. subtilis str. 168	63.551	92.775	0.59
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.145	95.954	0.587
recA	Streptococcus pneumoniae TIGR4	61.329	95.665	0.587
recA	Streptococcus pneumoniae Rx1	61.329	95.665	0.587
recA	Streptococcus pneumoniae D39	61.329	95.665	0.587
recA	Streptococcus pneumoniae R6	61.329	95.665	0.587
recA	Latilactobacillus sakei subsp. sakei 23K	59.412	98.266	0.584
recA	Streptococcus mitis NCTC 12261	61.027	95.665	0.584
recA	Streptococcus mitis SK321	61.027	95.665	0.584
recA	Streptococcus pyogenes NZ131	61.585	94.798	0.584
recA	Helicobacter pylori strain NCTC11637	60.55	94.509	0.572
recA	Helicobacter pylori 26695	60.245	94.509	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.581	89.595	0.561
recA	Lactococcus lactis subsp. cremoris KW2	59.752	93.353	0.558