Detailed information NTG0089012

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU48_RS02220
• Genome accession: NZ_AP024878
• Coordinates: 463105..464130 (+)
• Length: 341 a.a.
• NCBI ID: WP_141346821.1
• Uniprot ID: A0A4Y3HZD4
• Organism: Vibrio inusitatus strain LMG 23434
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 458105..469130

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU48_RS02205	rpoS	458558..459532 (+)	975	WP_141346824.1	RNA polymerase sigma factor RpoS	Regulator
OCU48_RS02210	mutS	459855..462422 (-)	2568	WP_141346823.1	DNA mismatch repair protein MutS	-
OCU48_RS02215	pncC	462505..462999 (+)	495	WP_208727212.1	nicotinamide-nucleotide amidase	-
OCU48_RS02220	recA	463105..464130 (+)	1026	WP_141346821.1	recombinase RecA	Machinery gene
OCU48_RS02225	recX	464232..464684 (+)	453	WP_141346820.1	recombination regulator RecX	-
OCU48_RS02230	alaS	464864..467455 (+)	2592	WP_141346819.1	alanine--tRNA ligase	-
OCU48_RS02235	-	467604..468776 (+)	1173	WP_141346818.1	aspartate kinase	-
OCU48_RS02240	csrA	468854..469051 (+)	198	WP_004415691.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36738.09 Da
• Isoelectric Point: 5.0352

>NTDB_id=89012 OCU48_RS02220 WP_141346821.1 463105..464130(+) (recA) [Vibrio inusitatus strain LMG 23434]
MDDNKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPIYAQKLGVNIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEIVGNE
TRIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKNKLVEKAGAWYSYQGDKIGQGKANAGKFLREHPETALEIDS
KLRAMLLTTAQLEDTQEAEVE

Nucleotide

• Length: 1026 bp

>NTDB_id=89012 OCU48_RS02220 WP_141346821.1 463105..464130(+) (recA) [Vibrio inusitatus strain LMG 23434]
ATGGACGATAACAAGCAAAAAGCTCTCGCGGCTGCACTTGGTCAAATAGAAAAGCAATTCGGTAAAGGCTCAATTATGCG
CCTTGGTGATAACCGCACCATGGACGTAGAAACAATTTCTACTGGTTCACTGTCTCTAGACATCGCTCTAGGTGCTGGTG
GTCTACCAATGGGACGCATCGTAGAAGTATACGGCCCTGAATCATCGGGTAAAACAACATTAACTCTAGAGTTAATTGCA
GCCGCTCAACGTGAAGGCAAAACGTGTGCCTTTATCGATGCAGAGCACGCACTAGACCCTATCTATGCACAAAAGCTTGG
CGTAAACATCGACGCTCTTTTAGTTTCTCAGCCAGATACTGGTGAGCAAGCTCTAGAGATCTGTGATGCACTAGCTCGTT
CTGGCGCGATCGACGTATTGGTTGTCGATTCAGTAGCAGCACTAACACCAAAAGCTGAAATTGAAGGCGAAATGGGCGAT
AGCCACATGGGCCTTCAGGCACGTATGCTTTCTCAAGCAATGCGTAAGCTAACGGGTAACTTAAAACAATCTAACTGTAT
GTGTATCTTTATCAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAGACAACTACTGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGTCTTGATATCCGTCGTACTGGTGCTATCAAAGATGGTGACGAGATTGTTGGTAACGAA
ACCCGTATTAAAGTGGTTAAGAACAAGATTGCTGCACCATTTAAGCAAGCTGAAACCCAAATTATGTACGGTCAAGGCTT
CAACCGTGAAGGTGAGTTGATCGATCTAGGTGTTAAGAACAAGCTAGTAGAAAAAGCAGGTGCTTGGTACAGCTATCAAG
GCGACAAGATTGGTCAAGGTAAAGCAAACGCAGGTAAATTCCTTCGTGAGCACCCTGAAACAGCCCTCGAAATCGATAGC
AAGTTGCGTGCAATGTTGCTGACTACAGCTCAACTTGAAGACACTCAAGAGGCAGAGGTCGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A4Y3HZD4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.79	97.654	0.877
recA	Vibrio cholerae strain A1552	89.79	97.654	0.877
recA	Pseudomonas stutzeri DSM 10701	74.848	96.774	0.724
recA	Acinetobacter baumannii D1279779	71.304	100	0.721
recA	Acinetobacter baylyi ADP1	71.848	100	0.718
recA	Glaesserella parasuis strain SC1401	70.988	95.015	0.674
recA	Neisseria gonorrhoeae MS11	69.018	95.601	0.66
recA	Neisseria gonorrhoeae MS11	69.018	95.601	0.66
recA	Neisseria gonorrhoeae strain FA1090	69.018	95.601	0.66
recA	Ralstonia pseudosolanacearum GMI1000	68.712	95.601	0.657
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.577	93.548	0.604
recA	Bacillus subtilis subsp. subtilis str. 168	63.438	93.842	0.595
recA	Streptococcus pneumoniae D39	61.963	95.601	0.592
recA	Streptococcus pneumoniae TIGR4	61.963	95.601	0.592
recA	Streptococcus pneumoniae Rx1	61.963	95.601	0.592
recA	Streptococcus pneumoniae R6	61.963	95.601	0.592
recA	Helicobacter pylori strain NCTC11637	61.728	95.015	0.587
recA	Streptococcus pyogenes NZ131	61.538	95.308	0.587
recA	Helicobacter pylori 26695	61.42	95.015	0.584
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.121	97.067	0.584
recA	Streptococcus mitis SK321	61.043	95.601	0.584
recA	Streptococcus mitis NCTC 12261	61.043	95.601	0.584
recA	Latilactobacillus sakei subsp. sakei 23K	61.491	94.428	0.581
recA	Streptococcus mutans UA159	60.923	95.308	0.581
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.991	94.721	0.578
recA	Lactococcus lactis subsp. cremoris KW2	59.568	95.015	0.566