Detailed information NTG0088891

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU35_RS02405
• Genome accession: NZ_AP024864
• Coordinates: 495285..496310 (+)
• Length: 341 a.a.
• NCBI ID: WP_017027200.1
• Uniprot ID: -
• Organism: Vibrio breoganii strain CAIM 1829
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 490285..501310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU35_RS02390	rpoS	490936..491910 (+)	975	WP_017032790.1	RNA polymerase sigma factor RpoS	Regulator
OCU35_RS02395	mutS	492035..494602 (-)	2568	WP_261825587.1	DNA mismatch repair protein MutS	-
OCU35_RS02400	pncC	494685..495179 (+)	495	WP_170875150.1	nicotinamide-nucleotide amidase	-
OCU35_RS02405	recA	495285..496310 (+)	1026	WP_017027200.1	recombinase RecA	Machinery gene
OCU35_RS02410	recX	496416..496868 (+)	453	WP_261825588.1	recombination regulator RecX	-
OCU35_RS02415	alaS	497047..499638 (+)	2592	WP_102502068.1	alanine--tRNA ligase	-
OCU35_RS02420	-	499788..500960 (+)	1173	WP_065210206.1	aspartate kinase	-
OCU35_RS02425	csrA	501038..501235 (+)	198	WP_261825589.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36747.14 Da
• Isoelectric Point: 5.3147

>NTDB_id=88891 OCU35_RS02405 WP_017027200.1 495285..496310(+) (recA) [Vibrio breoganii strain CAIM 1829]
MDDNKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPIYAQKLGVNIDALLVSQPDTGEQALEICDALARSGAIDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYQGDKIGQGKANAGKFLREHPETALEIDS
KLRAMLLTTAQLEDTKEAEVE

Nucleotide

• Length: 1026 bp

>NTDB_id=88891 OCU35_RS02405 WP_017027200.1 495285..496310(+) (recA) [Vibrio breoganii strain CAIM 1829]
ATGGACGACAACAAGCAAAAAGCTCTCGCGGCTGCACTTGGCCAAATAGAAAAACAATTCGGTAAAGGCTCAATTATGCG
CCTTGGTGATAACCGCACCATGGACGTAGAAACTATTTCTACTGGCTCACTGTCTCTAGACATCGCTCTGGGTGCTGGTG
GCTTGCCAATGGGACGTATCGTAGAAGTCTACGGCCCTGAATCATCGGGTAAAACAACACTAACGCTAGAGTTGATTGCT
GCAGCTCAACGTGAAGGTAAAACGTGTGCCTTTATCGATGCAGAGCACGCACTTGACCCTATTTATGCGCAGAAGCTTGG
CGTAAACATTGATGCTCTTTTAGTTTCTCAGCCAGATACAGGTGAGCAAGCGTTAGAGATCTGTGACGCACTCGCTCGCT
CTGGCGCTATCGACGTATTGGTTGTCGATTCAGTTGCGGCACTAACACCAAAAGCTGAAATCGAAGGTGAGATGGGCGAC
AGCCACATGGGCCTTCAAGCTCGCATGCTTTCTCAAGCAATGCGTAAGCTAACCGGTAATCTTAAACAATCTAACTGTAT
GTGTATCTTTATCAACCAGATCCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAGACCACCACTGGTGGTAACGCAC
TTAAGTTCTACGCTTCTGTTCGTCTTGATATCCGTCGTACTGGCGCGATTAAAGATGGTGACGAGGTTGTTGGTAACGAA
ACCCGTATTAAGGTTGTTAAGAACAAGATTGCTGCACCGTTTAAACAAGCTGAAACCCAAATCATGTACGGTCAAGGCTT
TAACCGTGAAGGTGAGTTGATTGATCTAGGTGTGAAGCATAAGCTAGTCGAAAAAGCAGGTGCTTGGTACAGCTACCAAG
GCGACAAGATTGGCCAAGGTAAAGCAAACGCAGGTAAATTCCTTCGTGAGCACCCAGAAACAGCGCTAGAAATCGATAGC
AAGCTACGTGCAATGCTGCTGACTACGGCTCAGCTTGAAGACACTAAAGAGGCTGAGGTAGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	90.39	97.654	0.883
recA	Vibrio cholerae O1 biovar El Tor strain E7946	90.39	97.654	0.883
recA	Pseudomonas stutzeri DSM 10701	73.824	99.707	0.736
recA	Acinetobacter baumannii D1279779	71.014	100	0.718
recA	Acinetobacter baylyi ADP1	71.554	100	0.716
recA	Glaesserella parasuis strain SC1401	70.37	95.015	0.669
recA	Neisseria gonorrhoeae MS11	69.018	95.601	0.66
recA	Neisseria gonorrhoeae MS11	69.018	95.601	0.66
recA	Neisseria gonorrhoeae strain FA1090	69.018	95.601	0.66
recA	Ralstonia pseudosolanacearum GMI1000	69.018	95.601	0.66
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.577	93.548	0.604
recA	Bacillus subtilis subsp. subtilis str. 168	63.75	93.842	0.598
recA	Streptococcus mitis SK321	59.357	100	0.595
recA	Streptococcus pneumoniae Rx1	62.346	95.015	0.592
recA	Streptococcus pneumoniae D39	62.346	95.015	0.592
recA	Streptococcus pneumoniae R6	62.346	95.015	0.592
recA	Streptococcus pneumoniae TIGR4	62.346	95.015	0.592
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	97.067	0.587
recA	Helicobacter pylori strain NCTC11637	61.728	95.015	0.587
recA	Streptococcus pyogenes NZ131	61.538	95.308	0.587
recA	Helicobacter pylori 26695	61.42	95.015	0.584
recA	Streptococcus mitis NCTC 12261	61.043	95.601	0.584
recA	Latilactobacillus sakei subsp. sakei 23K	61.491	94.428	0.581
recA	Streptococcus mutans UA159	60.923	95.308	0.581
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.991	94.721	0.578
recA	Lactococcus lactis subsp. cremoris KW2	59.568	95.015	0.566