Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | RGB74_RS10370 | Genome accession | NZ_CP134049 |
| Coordinates | 2107659..2108699 (-) | Length | 346 a.a. |
| NCBI ID | WP_310759242.1 | Uniprot ID | - |
| Organism | Bacillus sp. NEB1478 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 2061678..2112204 | 2107659..2108699 | within | 0 |
Gene organization within MGE regions
Location: 2061678..2112204
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGB74_RS10155 (RGB74_10155) | - | 2062802..2064553 (-) | 1752 | WP_310759202.1 | ABC transporter transmembrane domain-containing protein | - |
| RGB74_RS10160 (RGB74_10160) | mnmH | 2064650..2065699 (-) | 1050 | WP_310759203.1 | tRNA 2-selenouridine(34) synthase MnmH | - |
| RGB74_RS10165 (RGB74_10165) | - | 2065793..2066011 (-) | 219 | WP_066241071.1 | YneF family protein | - |
| RGB74_RS10170 (RGB74_10170) | sirA | 2066090..2066530 (-) | 441 | WP_310759204.1 | sporulation inhibitor of replication protein SirA | - |
| RGB74_RS10175 (RGB74_10175) | tkt | 2066685..2068688 (-) | 2004 | WP_396136061.1 | transketolase | - |
| RGB74_RS10180 (RGB74_10180) | - | 2068863..2069147 (-) | 285 | WP_310759206.1 | iron-sulfur cluster biosynthesis family protein | - |
| RGB74_RS10185 (RGB74_10185) | - | 2069252..2069491 (-) | 240 | WP_310759207.1 | DUF896 domain-containing protein | - |
| RGB74_RS10190 (RGB74_10190) | - | 2069551..2070195 (-) | 645 | WP_310759208.1 | recombinase family protein | - |
| RGB74_RS10195 (RGB74_10195) | - | 2070215..2070481 (-) | 267 | WP_310759209.1 | LysM peptidoglycan-binding domain-containing protein | - |
| RGB74_RS10200 (RGB74_10200) | lexA | 2070643..2071257 (+) | 615 | WP_310759210.1 | transcriptional repressor LexA | - |
| RGB74_RS10205 (RGB74_10205) | - | 2071455..2071841 (-) | 387 | WP_310759211.1 | DUF1259 domain-containing protein | - |
| RGB74_RS10210 (RGB74_10210) | - | 2072263..2073303 (+) | 1041 | WP_310759212.1 | glycosyltransferase | - |
| RGB74_RS10215 (RGB74_10215) | - | 2073300..2074094 (+) | 795 | WP_310759213.1 | sugar phosphate nucleotidyltransferase | - |
| RGB74_RS10220 (RGB74_10220) | - | 2074084..2075250 (+) | 1167 | WP_310759214.1 | glycosyltransferase family 2 protein | - |
| RGB74_RS10225 (RGB74_10225) | - | 2075617..2076819 (+) | 1203 | WP_310759215.1 | glycosyltransferase family 2 protein | - |
| RGB74_RS10230 (RGB74_10230) | - | 2077086..2077961 (-) | 876 | WP_310759216.1 | LysR family transcriptional regulator | - |
| RGB74_RS10235 (RGB74_10235) | - | 2078148..2078312 (+) | 165 | WP_310759217.1 | hypothetical protein | - |
| RGB74_RS10240 (RGB74_10240) | - | 2078813..2079331 (-) | 519 | WP_310759218.1 | AAA family ATPase | - |
| RGB74_RS10245 (RGB74_10245) | - | 2079576..2080244 (-) | 669 | WP_310759219.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| RGB74_RS10250 (RGB74_10250) | - | 2080355..2080813 (-) | 459 | WP_310759220.1 | SRPBCC family protein | - |
| RGB74_RS10255 (RGB74_10255) | - | 2080829..2081329 (-) | 501 | WP_310759221.1 | MerR family transcriptional regulator | - |
| RGB74_RS10260 (RGB74_10260) | glnA | 2081752..2083086 (-) | 1335 | WP_310759222.1 | type I glutamate--ammonia ligase | - |
| RGB74_RS10265 (RGB74_10265) | - | 2083157..2083549 (-) | 393 | WP_310759223.1 | MerR family transcriptional regulator | - |
| RGB74_RS10270 (RGB74_10270) | - | 2083672..2084940 (-) | 1269 | WP_310759224.1 | methionine gamma-lyase family protein | - |
| RGB74_RS10275 (RGB74_10275) | hflX | 2084942..2086198 (-) | 1257 | WP_310759225.1 | GTPase HflX | - |
| RGB74_RS10280 (RGB74_10280) | spoVK | 2086238..2087188 (-) | 951 | WP_310759226.1 | stage V sporulation protein K | - |
| RGB74_RS10285 (RGB74_10285) | - | 2087460..2088080 (+) | 621 | WP_310759227.1 | YitT family protein | - |
| RGB74_RS10290 (RGB74_10290) | - | 2088207..2088800 (-) | 594 | WP_310759228.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| RGB74_RS10295 (RGB74_10295) | - | 2088906..2089883 (+) | 978 | WP_310759229.1 | tyrosine-type recombinase/integrase | - |
| RGB74_RS10300 (RGB74_10300) | hfq | 2089936..2090172 (-) | 237 | WP_251322232.1 | RNA chaperone Hfq | - |
| RGB74_RS10305 (RGB74_10305) | miaA | 2090204..2091154 (-) | 951 | WP_310759230.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| RGB74_RS10310 (RGB74_10310) | mutL | 2091164..2093035 (-) | 1872 | WP_310759231.1 | DNA mismatch repair endonuclease MutL | - |
| RGB74_RS10315 (RGB74_10315) | mutS | 2093050..2095644 (-) | 2595 | WP_310759232.1 | DNA mismatch repair protein MutS | - |
| RGB74_RS10320 (RGB74_10320) | - | 2096103..2096675 (-) | 573 | WP_310759233.1 | outer spore coat protein CotE | - |
| RGB74_RS10325 (RGB74_10325) | - | 2097208..2097654 (-) | 447 | WP_310759234.1 | RicAFT regulatory complex protein RicA family protein | - |
| RGB74_RS10330 (RGB74_10330) | miaB | 2097654..2099186 (-) | 1533 | WP_396135959.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| RGB74_RS10335 (RGB74_10335) | - | 2099521..2100696 (-) | 1176 | WP_310759236.1 | glycine C-acetyltransferase | - |
| RGB74_RS10340 (RGB74_10340) | tdh | 2100714..2101754 (-) | 1041 | WP_310759237.1 | L-threonine 3-dehydrogenase | - |
| RGB74_RS10345 (RGB74_10345) | - | 2101936..2102802 (-) | 867 | WP_310759238.1 | 2-oxoacid:ferredoxin oxidoreductase subunit beta | - |
| RGB74_RS10350 (RGB74_10350) | - | 2102804..2104546 (-) | 1743 | WP_310759239.1 | 2-oxoacid:acceptor oxidoreductase subunit alpha | - |
| RGB74_RS10355 (RGB74_10355) | spoVS | 2104957..2105217 (-) | 261 | WP_010193268.1 | stage V sporulation protein SpoVS | - |
| RGB74_RS10360 (RGB74_10360) | - | 2105205..2105330 (-) | 126 | WP_310759240.1 | hypothetical protein | - |
| RGB74_RS10365 (RGB74_10365) | rny | 2105802..2107367 (-) | 1566 | WP_310759241.1 | ribonuclease Y | - |
| RGB74_RS10370 (RGB74_10370) | recA | 2107659..2108699 (-) | 1041 | WP_310759242.1 | recombinase RecA | Machinery gene |
| RGB74_RS10375 (RGB74_10375) | cinA | 2108830..2110071 (-) | 1242 | WP_310759243.1 | competence/damage-inducible protein A | Machinery gene |
| RGB74_RS10380 (RGB74_10380) | pgsA | 2110229..2110807 (-) | 579 | WP_310759244.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| RGB74_RS10385 (RGB74_10385) | - | 2110850..2111704 (-) | 855 | WP_310759245.1 | RodZ domain-containing protein | - |
Sequence
Protein
Download Length: 346 a.a. Molecular weight: 37607.68 Da Isoelectric Point: 4.8307
>NTDB_id=878376 RGB74_RS10370 WP_310759242.1 2107659..2108699(-) (recA) [Bacillus sp. NEB1478]
MSDRKAALDMALRQIEKQFGKGSIMKLGEQTEQRISTVSSGSITLDIALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQRNGGQAAFIDAEHALDPDYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDVVGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISYQGEILDIGSDIDIVQKSGAWYSYEGERLGQGRENSKQFLKENPEIASAIVTE
IRNYYQLEGKGEIEAPAPTEEFELTE
MSDRKAALDMALRQIEKQFGKGSIMKLGEQTEQRISTVSSGSITLDIALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQRNGGQAAFIDAEHALDPDYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDILVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDVVGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISYQGEILDIGSDIDIVQKSGAWYSYEGERLGQGRENSKQFLKENPEIASAIVTE
IRNYYQLEGKGEIEAPAPTEEFELTE
Nucleotide
Download Length: 1041 bp
>NTDB_id=878376 RGB74_RS10370 WP_310759242.1 2107659..2108699(-) (recA) [Bacillus sp. NEB1478]
ATGAGCGACAGAAAAGCGGCTTTAGATATGGCGCTTCGTCAAATTGAAAAGCAATTTGGTAAAGGTTCCATTATGAAACT
TGGAGAACAAACAGAACAGCGAATTTCTACAGTTTCCAGCGGTTCTATCACCTTAGACATTGCATTAGGTATCGGCGGTT
ATCCGAGAGGAAGAATTATTGAGGTTTATGGACCAGAATCTTCAGGTAAAACAACTGTTGCGCTTCATGCGATTGCTGAA
GTACAGCGAAATGGCGGACAAGCAGCATTTATTGATGCTGAACATGCATTAGATCCTGATTATGCACAAAAGCTCGGTGT
AAATATTGATGAGTTATTGTTATCTCAGCCCGATACAGGAGAACAAGCTTTAGAAATTGCAGAAGCATTGGTTCGAAGCG
GAGCTGTTGATATTTTAGTCATTGACTCTGTTGCGGCGCTTGTTCCAAAAGCTGAAATTGAAGGTGAGATGGGTGACTCT
CACGTTGGTTTGCAGGCTCGACTTATGTCTCAAGCATTGCGTAAGCTTTCTGGAGCGATTAATAAATCGAAAACAATTGC
GATCTTTATTAACCAGATTCGTGAAAAAGTCGGAGTTATGTTCGGAAACCCAGAAACTACACCAGGGGGAAGAGCATTAA
AGTTCTACTCATCTGTTCGTTTGGAAGTTCGACGTGCTGAACAGCTTAAACAAGGTCAAGACGTTGTTGGTAACAAAACA
AAGATTAAAGTTGTTAAAAACAAAGTAGCTCCACCATTTAGAACAGCTGAAGTTGATATCATGTATGGAGAAGGAATTTC
CTATCAAGGTGAAATTCTGGATATCGGATCAGATATTGATATCGTTCAAAAAAGTGGTGCTTGGTACTCATATGAAGGTG
AGCGTTTAGGGCAAGGCCGTGAAAACTCTAAACAATTTTTAAAAGAAAATCCAGAAATTGCTTCTGCCATTGTTACTGAA
ATTCGTAACTATTATCAATTAGAGGGCAAAGGGGAAATTGAAGCTCCTGCTCCTACAGAAGAGTTTGAACTAACGGAATA
A
ATGAGCGACAGAAAAGCGGCTTTAGATATGGCGCTTCGTCAAATTGAAAAGCAATTTGGTAAAGGTTCCATTATGAAACT
TGGAGAACAAACAGAACAGCGAATTTCTACAGTTTCCAGCGGTTCTATCACCTTAGACATTGCATTAGGTATCGGCGGTT
ATCCGAGAGGAAGAATTATTGAGGTTTATGGACCAGAATCTTCAGGTAAAACAACTGTTGCGCTTCATGCGATTGCTGAA
GTACAGCGAAATGGCGGACAAGCAGCATTTATTGATGCTGAACATGCATTAGATCCTGATTATGCACAAAAGCTCGGTGT
AAATATTGATGAGTTATTGTTATCTCAGCCCGATACAGGAGAACAAGCTTTAGAAATTGCAGAAGCATTGGTTCGAAGCG
GAGCTGTTGATATTTTAGTCATTGACTCTGTTGCGGCGCTTGTTCCAAAAGCTGAAATTGAAGGTGAGATGGGTGACTCT
CACGTTGGTTTGCAGGCTCGACTTATGTCTCAAGCATTGCGTAAGCTTTCTGGAGCGATTAATAAATCGAAAACAATTGC
GATCTTTATTAACCAGATTCGTGAAAAAGTCGGAGTTATGTTCGGAAACCCAGAAACTACACCAGGGGGAAGAGCATTAA
AGTTCTACTCATCTGTTCGTTTGGAAGTTCGACGTGCTGAACAGCTTAAACAAGGTCAAGACGTTGTTGGTAACAAAACA
AAGATTAAAGTTGTTAAAAACAAAGTAGCTCCACCATTTAGAACAGCTGAAGTTGATATCATGTATGGAGAAGGAATTTC
CTATCAAGGTGAAATTCTGGATATCGGATCAGATATTGATATCGTTCAAAAAAGTGGTGCTTGGTACTCATATGAAGGTG
AGCGTTTAGGGCAAGGCCGTGAAAACTCTAAACAATTTTTAAAAGAAAATCCAGAAATTGCTTCTGCCATTGTTACTGAA
ATTCGTAACTATTATCAATTAGAGGGCAAAGGGGAAATTGAAGCTCCTGCTCCTACAGAAGAGTTTGAACTAACGGAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.