Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   QNH36_RS09475 Genome accession   NZ_CP126080
Coordinates   1921582..1922622 (+) Length   346 a.a.
NCBI ID   WP_144474941.1    Uniprot ID   A0AA95I349
Organism   Mesobacillus sp. AQ2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1916582..1927622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH36_RS09450 (QNH36_09450) - 1917080..1917337 (+) 258 WP_251541946.1 DUF3243 domain-containing protein -
  QNH36_RS09455 (QNH36_09455) - 1917532..1918323 (+) 792 WP_144475010.1 DUF3388 domain-containing protein -
  QNH36_RS09460 (QNH36_09460) - 1918344..1919225 (+) 882 WP_144474938.1 RodZ domain-containing protein -
  QNH36_RS09465 (QNH36_09465) pgsA 1919449..1920027 (+) 579 WP_144474939.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QNH36_RS09470 (QNH36_09470) cinA 1920051..1921298 (+) 1248 WP_283905081.1 competence/damage-inducible protein A Machinery gene
  QNH36_RS09475 (QNH36_09475) recA 1921582..1922622 (+) 1041 WP_144474941.1 recombinase RecA Machinery gene
  QNH36_RS09480 (QNH36_09480) rny 1922918..1924480 (+) 1563 WP_144475011.1 ribonuclease Y -
  QNH36_RS09485 (QNH36_09485) - 1924593..1925390 (+) 798 WP_144474942.1 TIGR00282 family metallophosphoesterase -
  QNH36_RS09490 (QNH36_09490) spoVS 1926569..1926829 (+) 261 WP_010193268.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37520.63 Da        Isoelectric Point: 4.9040

>NTDB_id=834699 QNH36_RS09475 WP_144474941.1 1921582..1922622(+) (recA) [Mesobacillus sp. AQ2]
MSDRQAALDMALKQIEKQFGKGSVMKLGEKTDTKISTSPSGSLALDTALGIGGYPRGRVIEIYGPESSGKTTVALHAIAE
VQANGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAIDIIVIDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAETLKQGNDMVGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDMGSDLDIVDKSGSWYSYNGERLGQGRENAKIFLKENPSIRLEIQKK
IRDHYGLDGEFTVTETDEDQEELQLD

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=834699 QNH36_RS09475 WP_144474941.1 1921582..1922622(+) (recA) [Mesobacillus sp. AQ2]
GTGAGTGATCGTCAAGCGGCGTTAGATATGGCATTAAAACAAATCGAAAAGCAATTTGGTAAAGGCTCTGTAATGAAGTT
GGGTGAGAAGACAGATACCAAGATTTCTACTTCTCCAAGTGGTTCTCTTGCGCTGGACACAGCGCTGGGAATAGGCGGCT
ATCCTCGCGGACGTGTTATCGAAATCTATGGACCTGAAAGTTCAGGTAAGACAACTGTTGCGCTCCATGCGATTGCTGAG
GTGCAGGCTAATGGCGGCCAGGCAGCGTTCATTGACGCTGAACACGCGCTGGATCCTGTATATGCACAAAAACTCGGTGT
AAACATTGATGAGCTTCTTTTGTCACAGCCGGACACAGGAGAGCAGGCGCTTGAAATCGCTGAAGCACTTGTACGAAGCG
GCGCGATTGATATCATTGTTATTGACTCCGTTGCAGCTCTAGTCCCTAAGGCAGAAATCGAAGGTGAGATGGGTGATTCC
CATGTCGGTCTTCAGGCTCGTTTGATGTCCCAGGCATTGCGCAAACTTTCCGGTGCAATCAACAAATCAAAGACTATCGC
GATCTTCATCAACCAGATTCGTGAAAAGGTTGGCGTCATGTTCGGTAACCCTGAGACTACACCAGGCGGCCGTGCTTTGA
AGTTCTACTCAAGTGTCCGTCTTGAAGTGCGCCGTGCTGAAACGTTGAAGCAGGGCAATGACATGGTCGGTAACAAAACG
AAGATTAAAGTTGTCAAGAACAAGGTTGCACCTCCGTTCCGTACAGCTGAAGTGGATATCATGTACGGTGAAGGAATCTC
CAAAGAAGGTGAAATCATCGATATGGGATCAGACCTTGATATCGTAGATAAAAGCGGTTCATGGTATTCCTATAATGGTG
AACGTCTTGGACAGGGAAGGGAAAACGCAAAGATTTTCCTTAAAGAAAACCCATCCATCCGTCTTGAAATTCAGAAGAAA
ATCCGTGACCACTACGGTCTGGATGGCGAATTCACTGTGACTGAAACAGACGAAGACCAGGAAGAACTTCAACTGGATTA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

91.159

94.798

0.864
  recA Latilactobacillus sakei subsp. sakei 23K

75.385

93.931

0.708
  recA Streptococcus mitis NCTC 12261

65.922

100

0.682
  recA Streptococcus mitis SK321

65.826

100

0.679
  recA Streptococcus pneumoniae TIGR4

68.622

98.555

0.676
  recA Streptococcus pneumoniae Rx1

68.622

98.555

0.676
  recA Streptococcus pneumoniae D39

68.622

98.555

0.676
  recA Streptococcus pneumoniae R6

68.622

98.555

0.676
  recA Streptococcus mutans UA159

67.151

99.422

0.668
  recA Streptococcus pyogenes NZ131

68.902

94.798

0.653
  recA Lactococcus lactis subsp. cremoris KW2

66.364

95.376

0.633
  recA Neisseria gonorrhoeae MS11

64.307

97.977

0.63
  recA Neisseria gonorrhoeae MS11

64.307

97.977

0.63
  recA Neisseria gonorrhoeae strain FA1090

64.307

97.977

0.63
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

63.824

98.266

0.627
  recA Helicobacter pylori 26695

63.265

99.133

0.627
  recA Helicobacter pylori strain NCTC11637

63.265

99.133

0.627
  recA Ralstonia pseudosolanacearum GMI1000

65.244

94.798

0.618
  recA Acinetobacter baumannii D1279779

60.694

100

0.607
  recA Vibrio cholerae strain A1552

64.798

92.775

0.601
  recA Vibrio cholerae O1 biovar El Tor strain E7946

64.798

92.775

0.601
  recA Acinetobacter baylyi ADP1

60.641

99.133

0.601
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.997

94.509

0.595
  recA Pseudomonas stutzeri DSM 10701

63.75

92.486

0.59
  recA Glaesserella parasuis strain SC1401

62.813

92.486

0.581
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.625

92.486

0.561