Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QNH36_RS09470 Genome accession   NZ_CP126080
Coordinates   1920051..1921298 (+) Length   415 a.a.
NCBI ID   WP_283905081.1    Uniprot ID   A0AA95L0M1
Organism   Mesobacillus sp. AQ2     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1915051..1926298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH36_RS09445 (QNH36_09445) - 1916256..1916978 (+) 723 WP_251541948.1 SDR family oxidoreductase -
  QNH36_RS09450 (QNH36_09450) - 1917080..1917337 (+) 258 WP_251541946.1 DUF3243 domain-containing protein -
  QNH36_RS09455 (QNH36_09455) - 1917532..1918323 (+) 792 WP_144475010.1 DUF3388 domain-containing protein -
  QNH36_RS09460 (QNH36_09460) - 1918344..1919225 (+) 882 WP_144474938.1 RodZ domain-containing protein -
  QNH36_RS09465 (QNH36_09465) pgsA 1919449..1920027 (+) 579 WP_144474939.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QNH36_RS09470 (QNH36_09470) cinA 1920051..1921298 (+) 1248 WP_283905081.1 competence/damage-inducible protein A Machinery gene
  QNH36_RS09475 (QNH36_09475) recA 1921582..1922622 (+) 1041 WP_144474941.1 recombinase RecA Machinery gene
  QNH36_RS09480 (QNH36_09480) rny 1922918..1924480 (+) 1563 WP_144475011.1 ribonuclease Y -
  QNH36_RS09485 (QNH36_09485) - 1924593..1925390 (+) 798 WP_144474942.1 TIGR00282 family metallophosphoesterase -

Sequence

Protein


Download         Length: 415 a.a.        Molecular weight: 44701.05 Da        Isoelectric Point: 4.9265

>NTDB_id=834698 QNH36_RS09470 WP_283905081.1 1920051..1921298(+) (cinA) [Mesobacillus sp. AQ2]
MNAEIIAVGSELLLGQIVNTNARFLSRQLADLGINVFYHTVVGDNSDRLKSAIRIAQERAELIIFTGGLGPTKDDLTKDT
IAAQLGKKLVLDEEAMRSIELYFEKTKRVMTENNRKQALVIDGSVILKNENGMAPGMFLSTSDHKYMLLPGPPSEMEPMF
LKYGQAAITGINGSQARIESRVLRFFGIGEAALEAQIEDLIDQQSNPTIAPLAGDGEVTLRLTARDDANGTAQELIDKVE
AEIMDRVGEYFYGYDETSLILELSKLVKSKNLTISAAESLTGGMFQEELTSVSGASSLFKGGIVCYSNEAKIGLVNVSPA
TIENFGAVSKECAEELAVNIASITNSEIGLGFTGVAGPDSLEGHPAGTVFIGVHVKGKPVHVEKLNLSGSRAAIRSRSVK
FGCQLLINRLSETRK

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=834698 QNH36_RS09470 WP_283905081.1 1920051..1921298(+) (cinA) [Mesobacillus sp. AQ2]
ATGAATGCAGAAATCATAGCAGTTGGATCTGAATTGCTTCTCGGGCAAATTGTCAATACAAACGCCAGGTTCCTGTCAAG
GCAGCTTGCAGACCTGGGAATCAATGTATTCTATCACACGGTTGTCGGGGATAATTCCGATAGGCTGAAAAGTGCAATCA
GGATTGCCCAGGAACGTGCAGAATTGATCATTTTCACTGGCGGCCTTGGGCCAACTAAAGATGACCTCACCAAAGATACC
ATTGCCGCTCAGCTCGGAAAGAAATTGGTGCTTGATGAGGAAGCCATGAGGTCGATCGAACTCTATTTTGAAAAAACGAA
GAGGGTAATGACCGAGAATAACAGGAAGCAGGCTCTCGTGATTGACGGTTCCGTTATTCTTAAGAACGAAAATGGCATGG
CTCCGGGTATGTTCCTGTCAACATCTGACCACAAGTATATGCTGTTGCCGGGTCCTCCTTCTGAAATGGAGCCCATGTTC
CTGAAATATGGCCAGGCAGCTATCACTGGCATAAATGGCAGCCAGGCAAGGATTGAATCAAGAGTCCTGCGTTTTTTTGG
AATAGGCGAGGCAGCATTGGAAGCACAAATAGAGGATTTAATCGATCAGCAAAGCAATCCGACCATTGCCCCGCTGGCAG
GTGACGGGGAAGTGACCCTGAGGCTTACAGCAAGAGATGATGCTAATGGCACTGCCCAGGAATTAATTGATAAAGTGGAA
GCGGAAATCATGGACAGAGTCGGCGAGTATTTCTATGGTTACGACGAAACCTCACTAATATTGGAACTTTCCAAACTAGT
AAAAAGCAAGAACTTGACGATATCAGCAGCGGAAAGCCTTACAGGCGGGATGTTCCAGGAGGAATTGACCTCTGTTTCCG
GAGCCAGCAGCCTTTTTAAGGGCGGGATTGTATGCTATTCAAATGAGGCTAAAATCGGACTGGTGAACGTCAGCCCTGCT
ACAATAGAGAACTTCGGGGCTGTCAGCAAAGAATGTGCGGAAGAGCTTGCGGTCAATATTGCATCGATCACCAATTCGGA
AATTGGCTTAGGCTTCACGGGAGTGGCAGGCCCTGACTCTCTTGAAGGGCATCCGGCAGGAACTGTTTTCATTGGTGTAC
ATGTAAAGGGGAAGCCAGTGCATGTAGAAAAATTGAACCTGAGCGGGTCACGAGCTGCAATCAGGAGCAGGTCAGTGAAG
TTTGGCTGCCAGCTGCTAATTAATAGATTATCAGAAACACGGAAGTGA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(259-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.756

98.795

0.59
  cinA Streptococcus mitis NCTC 12261

46.394

100

0.465
  cinA Streptococcus mitis SK321

46.394

100

0.465
  cinA Streptococcus pneumoniae TIGR4

46.154

100

0.463
  cinA Streptococcus pneumoniae Rx1

45.673

100

0.458
  cinA Streptococcus pneumoniae R6

45.673

100

0.458
  cinA Streptococcus pneumoniae D39

45.433

100

0.455
  cinA Streptococcus mutans UA159

44.913

97.108

0.436