Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   H7675_RS08915 Genome accession   NZ_AP023389
Coordinates   1783226..1784362 (-) Length   378 a.a.
NCBI ID   WP_184004726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain KUN-0012590     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1778226..1789362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7675_RS08890 (KUN2590_17090) - 1779447..1781006 (-) 1560 WP_002992833.1 membrane protein -
  H7675_RS08895 (KUN2590_17100) - 1781420..1781725 (-) 306 WP_002982199.1 DUF1292 domain-containing protein -
  H7675_RS08900 (KUN2590_17110) ruvX 1781737..1782156 (-) 420 WP_002982196.1 Holliday junction resolvase RuvX -
  H7675_RS08905 (KUN2590_17120) - 1782153..1782422 (-) 270 WP_002982194.1 IreB family regulatory phosphoprotein -
  H7675_RS08910 (KUN2590_17130) spx 1782537..1782935 (-) 399 WP_002982188.1 transcriptional regulator Spx -
  H7675_RS08915 (KUN2590_17140) recA 1783226..1784362 (-) 1137 WP_184004726.1 recombinase RecA Machinery gene
  H7675_RS08920 (KUN2590_17150) cinA 1784451..1785722 (-) 1272 WP_184004729.1 competence/damage-inducible protein A Machinery gene
  H7675_RS08925 (KUN2590_17160) - 1785791..1786351 (-) 561 WP_023079151.1 DNA-3-methyladenine glycosylase I -
  H7675_RS08930 (KUN2590_17170) ruvA 1786361..1786957 (-) 597 WP_031488763.1 Holliday junction branch migration protein RuvA -
  H7675_RS08935 (KUN2590_17180) - 1786959..1788179 (-) 1221 WP_136285989.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 378 a.a.        Molecular weight: 40659.28 Da        Isoelectric Point: 4.9004

>NTDB_id=82810 H7675_RS08915 WP_184004726.1 1783226..1784362(-) (recA) [Streptococcus pyogenes strain KUN-0012590]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIVLGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPQLFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=82810 H7675_RS08915 WP_184004726.1 1783226..1784362(-) (recA) [Streptococcus pyogenes strain KUN-0012590]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGTGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCTGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGCATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCATCCACAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus pyogenes NZ131

99.471

100

0.995
  recA Streptococcus mutans UA159

87.206

100

0.884
  recA Streptococcus mitis NCTC 12261

85.079

100

0.86
  recA Streptococcus pneumoniae Rx1

84.156

100

0.857
  recA Streptococcus pneumoniae D39

84.156

100

0.857
  recA Streptococcus pneumoniae R6

84.156

100

0.857
  recA Streptococcus pneumoniae TIGR4

84.156

100

0.857
  recA Streptococcus mitis SK321

85.039

100

0.857
  recA Lactococcus lactis subsp. cremoris KW2

78.47

93.386

0.733
  recA Latilactobacillus sakei subsp. sakei 23K

70.326

89.153

0.627
  recA Bacillus subtilis subsp. subtilis str. 168

67.781

87.037

0.59
  recA Acinetobacter baumannii D1279779

59.207

93.386

0.553
  recA Acinetobacter baylyi ADP1

59.714

92.593

0.553
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.721

89.153

0.55
  recA Neisseria gonorrhoeae MS11

59.767

90.741

0.542
  recA Neisseria gonorrhoeae MS11

59.767

90.741

0.542
  recA Neisseria gonorrhoeae strain FA1090

59.767

90.741

0.542
  recA Vibrio cholerae strain A1552

58

92.593

0.537
  recA Vibrio cholerae O1 biovar El Tor strain E7946

58

92.593

0.537
  recA Glaesserella parasuis strain SC1401

59.412

89.947

0.534
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.229

85.45

0.532
  recA Pseudomonas stutzeri DSM 10701

56.609

92.063

0.521
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.61

87.566

0.513
  recA Helicobacter pylori strain NCTC11637

57.784

88.36

0.511
  recA Helicobacter pylori 26695

57.784

88.36

0.511
  recA Ralstonia pseudosolanacearum GMI1000

57.53

87.831

0.505

Multiple sequence alignment