Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   P3R60_RS06620 Genome accession   NZ_CP120510
Coordinates   1263148..1264290 (+) Length   380 a.a.
NCBI ID   WP_115131052.1    Uniprot ID   A0A345VN40
Organism   Streptococcus pluranimalium strain SP21-2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1258148..1269290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3R60_RS06595 - 1258249..1259472 (+) 1224 WP_316606032.1 MFS transporter -
  P3R60_RS06600 ruvA 1259482..1260075 (+) 594 WP_218653793.1 Holliday junction branch migration protein RuvA -
  P3R60_RS06605 - 1260112..1260663 (+) 552 WP_316606033.1 DNA-3-methyladenine glycosylase I -
  P3R60_RS06610 - 1260787..1261371 (-) 585 WP_316606034.1 helix-turn-helix transcriptional regulator -
  P3R60_RS06615 cinA 1261748..1263004 (+) 1257 WP_316606035.1 competence/damage-inducible protein A Machinery gene
  P3R60_RS06620 recA 1263148..1264290 (+) 1143 WP_115131052.1 recombinase RecA Machinery gene
  P3R60_RS06625 spx 1264730..1265128 (+) 399 WP_104968717.1 transcriptional regulator Spx -
  P3R60_RS06630 - 1265179..1266309 (-) 1131 WP_316606036.1 N-acetyldiaminopimelate deacetylase -
  P3R60_RS06635 dapD 1266364..1267062 (-) 699 WP_316606037.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  P3R60_RS06640 - 1267324..1267581 (-) 258 WP_316606038.1 hypothetical protein -
  P3R60_RS06645 - 1267593..1268099 (-) 507 WP_316606039.1 hypothetical protein -
  P3R60_RS06650 pgi 1268236..1268424 (-) 189 Protein_1264 glucose-6-phosphate isomerase -
  P3R60_RS06655 - 1268439..1269137 (-) 699 WP_218653786.1 fructose-6-phosphate aldolase -

Sequence

Protein


Download         Length: 380 a.a.        Molecular weight: 40898.66 Da        Isoelectric Point: 4.8357

>NTDB_id=805863 P3R60_RS06620 WP_115131052.1 1263148..1264290(+) (recA) [Streptococcus pluranimalium strain SP21-2]
MAKKQKKLDDISKKFGEERQKALDDALKNIEKDFGKGAIMKLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPMYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYSSVRLDVRG
NTQIKGTGDKKDQNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKKFLAENPAIFDEIDQKVRVHFGMIEAPEGDELPVEDAKSVETDELVLDLDGGIEIEE

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=805863 P3R60_RS06620 WP_115131052.1 1263148..1264290(+) (recA) [Streptococcus pluranimalium strain SP21-2]
TTGGCTAAAAAACAAAAAAAATTAGATGATATTTCTAAAAAATTTGGTGAGGAGCGTCAAAAGGCGCTCGATGATGCCCT
TAAAAATATCGAAAAGGATTTCGGTAAGGGAGCCATCATGAAACTTGGGGAACGTGCTGAGCAGAAAGTTCAAGTGATGA
GTTCAGGCTCATTGGCACTTGATATTGCCCTTGGTGCAGGTGGTTACCCTAAAGGCCGTATCATTGAAATCTACGGTCCT
GAGAGCTCTGGTAAAACAACCGTTGCGCTTCATGCTGTTGCTCAAGCTCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCTGAGCACGCATTGGATCCTATGTATGCTCAAGCACTTGGGGTTAATATTGATGAATTGCTCTTGTCTCAACCAGATT
CTGGAGAGCAAGGTCTTGAAATCGCTGGTAAATTGATTGATTCAGGTGCCGTTGACTTGGTTGTTGTCGACTCTGTTGCG
GCTCTTGTTCCTCGCGCTGAAATTGACGGTGATATCGGTGATAGCCATGTTGGTTTGCAAGCGCGTATGATGAGCCAAGC
CATGCGTAAACTATCAGCTTCTATTAACAAAACCAAAACGATTGCAATTTTTATCAACCAATTGCGTGAAAAGGTTGGGG
TCATGTTTGGTAATCCTGAAACAACACCTGGTGGACGTGCCCTTAAATTCTACTCATCTGTTCGTTTGGATGTTCGTGGT
AACACGCAAATCAAGGGAACTGGTGATAAGAAAGACCAAAACGTTGGTAAGGAAACTAAAATCAAGGTTGTTAAAAACAA
GGTTGCACCACCATTCAAAGAAGCATTTGTGGAAATTATGTATGGTGAAGGGATTTCACGTACTGGAGAATTAGTCAAGA
TTGCTAGTGATTTAGATATTATTCAAAAAGCTGGTGCTTGGTTCTCTTATAATGGTGAAAAGATCGGTCAGGGGTCTGAA
AATGCTAAGAAATTCTTGGCAGAAAATCCAGCCATCTTTGACGAAATCGATCAAAAAGTGCGCGTGCATTTTGGAATGAT
TGAGGCGCCAGAAGGTGATGAACTACCAGTAGAAGATGCTAAATCAGTAGAGACGGACGAACTTGTCTTAGATCTTGATG
GTGGTATTGAAATTGAGGAGTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345VN40

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mutans UA159

86.494

100

0.876
  recA Streptococcus pyogenes NZ131

87.632

100

0.876
  recA Streptococcus mitis NCTC 12261

86.352

100

0.866
  recA Streptococcus mitis SK321

85.564

100

0.858
  recA Streptococcus pneumoniae D39

84.675

100

0.858
  recA Streptococcus pneumoniae Rx1

84.675

100

0.858
  recA Streptococcus pneumoniae R6

84.675

100

0.858
  recA Streptococcus pneumoniae TIGR4

84.675

100

0.858
  recA Lactococcus lactis subsp. cremoris KW2

76.857

92.105

0.708
  recA Latilactobacillus sakei subsp. sakei 23K

68.805

90.263

0.621
  recA Bacillus subtilis subsp. subtilis str. 168

70.517

86.579

0.611
  recA Neisseria gonorrhoeae strain FA1090

60.684

92.368

0.561
  recA Neisseria gonorrhoeae MS11

60.684

92.368

0.561
  recA Neisseria gonorrhoeae MS11

60.684

92.368

0.561
  recA Vibrio cholerae strain A1552

59.375

92.632

0.55
  recA Vibrio cholerae O1 biovar El Tor strain E7946

59.375

92.632

0.55
  recA Glaesserella parasuis strain SC1401

60.882

89.474

0.545
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.963

85.263

0.537
  recA Acinetobacter baumannii D1279779

62.154

85.526

0.532
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.094

86.579

0.529
  recA Acinetobacter baylyi ADP1

61.231

85.526

0.524
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.895

90

0.521
  recA Helicobacter pylori 26695

57.225

91.053

0.521
  recA Helicobacter pylori strain NCTC11637

57.225

91.053

0.521
  recA Ralstonia pseudosolanacearum GMI1000

61.199

83.421

0.511
  recA Pseudomonas stutzeri DSM 10701

58.232

86.316

0.503