Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   P3T75_RS12855 Genome accession   NZ_CP120467
Coordinates   2682248..2683288 (-) Length   346 a.a.
NCBI ID   WP_206902671.1    Uniprot ID   -
Organism   Enterococcus montenegrensis strain CoE-012-22     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2677248..2688288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3T75_RS12840 (P3T75_12835) - 2678330..2679256 (-) 927 WP_206902646.1 carbohydrate ABC transporter permease -
  P3T75_RS12845 (P3T75_12840) - 2679270..2680214 (-) 945 WP_206902647.1 sugar ABC transporter permease -
  P3T75_RS12850 (P3T75_12845) - 2680589..2682196 (+) 1608 WP_282461804.1 C39 family peptidase -
  P3T75_RS12855 (P3T75_12850) recA 2682248..2683288 (-) 1041 WP_206902671.1 recombinase RecA Machinery gene
  P3T75_RS12860 (P3T75_12855) cinA 2683507..2684742 (-) 1236 WP_282461805.1 competence/damage-inducible protein A Machinery gene
  P3T75_RS12865 (P3T75_12860) pgsA 2684996..2685574 (-) 579 WP_282461806.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  P3T75_RS12870 (P3T75_12865) - 2685607..2686515 (-) 909 WP_282461807.1 helix-turn-helix domain-containing protein -
  P3T75_RS12875 (P3T75_12870) ymfI 2686536..2687261 (-) 726 WP_282461808.1 elongation factor P 5-aminopentanone reductase -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37162.32 Da        Isoelectric Point: 4.9750

>NTDB_id=805761 P3T75_RS12855 WP_206902671.1 2682248..2683288(-) (recA) [Enterococcus montenegrensis strain CoE-012-22]
MADDRKAALDAALKKIEKNYGKGAVMKLGEKADQQVSTIPSGSLALDVALGVGGYPRGRIVEIYGPESSGKTTVALHAIA
EVQKNGGTAAFIDAEHALDPLYAQKLGVNIDELLLSQPDTGEQGLEIADALVSSGAIDIVVIDSVAALVPRAEIDGEMGD
AHVGLQARLMSQALRKLSGSINKTKTIAVFINQIREKVGIMFGNPETTPGGRALKFYATIRLEVRRAEQLKSGTDIIGNR
TKIKVVKNKVAPPFKIAEVDLMYGQGISQEGELLDMAVEQDIVDKSGAWYSYKGDRIGQGRDNAKNYMKEHPEMKAEIST
RVREAYGIGDGSEVTVEEAQEELPLD

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=805761 P3T75_RS12855 WP_206902671.1 2682248..2683288(-) (recA) [Enterococcus montenegrensis strain CoE-012-22]
TTGGCAGACGATCGCAAAGCAGCCTTAGATGCTGCGTTAAAGAAAATTGAAAAAAACTACGGTAAAGGCGCCGTGATGAA
ATTAGGAGAAAAGGCAGATCAACAAGTTTCCACTATTCCAAGTGGTTCGCTAGCTTTAGATGTAGCCTTAGGTGTTGGCG
GTTATCCTCGTGGGCGAATTGTTGAAATTTACGGTCCTGAAAGTTCTGGTAAAACAACCGTTGCGCTACACGCGATTGCG
GAAGTGCAAAAAAATGGCGGGACAGCTGCTTTTATCGATGCAGAGCATGCGTTAGATCCATTGTATGCACAAAAATTAGG
CGTTAATATTGACGAGTTACTATTGTCACAACCAGATACAGGGGAACAAGGATTGGAAATTGCGGATGCTTTGGTTTCCA
GTGGTGCCATTGACATTGTTGTTATCGACTCGGTGGCAGCTTTAGTACCCCGGGCAGAAATTGATGGTGAAATGGGGGAT
GCCCACGTTGGTTTGCAAGCGCGTTTGATGTCACAAGCATTGCGCAAACTTTCAGGCTCCATTAATAAAACCAAAACAAT
CGCAGTCTTTATTAACCAAATTCGTGAAAAAGTCGGCATTATGTTTGGTAACCCCGAAACAACACCAGGTGGACGGGCGT
TGAAATTCTACGCAACGATTCGTTTAGAAGTTCGTCGTGCAGAACAATTAAAATCTGGGACAGATATTATTGGGAACCGG
ACGAAAATCAAAGTTGTTAAAAACAAAGTAGCACCACCTTTTAAAATAGCTGAAGTCGACTTAATGTATGGTCAAGGTAT
CTCGCAAGAAGGAGAGCTTTTAGATATGGCGGTAGAACAAGATATCGTTGATAAAAGCGGTGCTTGGTATTCTTACAAGG
GCGATCGTATCGGCCAAGGTCGTGATAATGCCAAAAACTACATGAAAGAACATCCTGAAATGAAAGCTGAAATCTCAACG
CGTGTCAGAGAAGCATATGGCATCGGAGATGGTAGTGAAGTAACTGTTGAAGAAGCACAAGAAGAATTACCTTTAGATTA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(8-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Latilactobacillus sakei subsp. sakei 23K

78.235

98.266

0.769
  recA Bacillus subtilis subsp. subtilis str. 168

76.615

93.931

0.72
  recA Streptococcus pneumoniae D39

66.389

100

0.691
  recA Streptococcus pneumoniae R6

66.389

100

0.691
  recA Streptococcus pneumoniae TIGR4

66.389

100

0.691
  recA Streptococcus pneumoniae Rx1

66.389

100

0.691
  recA Streptococcus mitis SK321

66.573

100

0.685
  recA Streptococcus mitis NCTC 12261

66.292

100

0.682
  recA Streptococcus mutans UA159

69.97

96.243

0.673
  recA Streptococcus pyogenes NZ131

70.091

95.665

0.671
  recA Lactococcus lactis subsp. cremoris KW2

68.657

96.821

0.665
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

64.134

95.087

0.61
  recA Neisseria gonorrhoeae strain FA1090

63.83

95.087

0.607
  recA Neisseria gonorrhoeae MS11

63.83

95.087

0.607
  recA Neisseria gonorrhoeae MS11

63.83

95.087

0.607
  recA Ralstonia pseudosolanacearum GMI1000

63.303

94.509

0.598
  recA Acinetobacter baylyi ADP1

60.174

99.422

0.598
  recA Acinetobacter baumannii D1279779

60.234

98.844

0.595
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

60.79

95.087

0.578
  recA Vibrio cholerae strain A1552

61.728

93.642

0.578
  recA Vibrio cholerae O1 biovar El Tor strain E7946

61.728

93.642

0.578
  recA Pseudomonas stutzeri DSM 10701

61.61

93.353

0.575
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.303

95.376

0.575
  recA Helicobacter pylori 26695

60.123

94.22

0.566
  recA Helicobacter pylori strain NCTC11637

60.123

94.22

0.566
  recA Glaesserella parasuis strain SC1401

61.059

92.775

0.566