Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | P1Y72_RS05365 | Genome accession | NZ_CP119599 |
| Coordinates | 1126083..1127219 (+) | Length | 378 a.a. |
| NCBI ID | WP_010922753.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain 1133 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1108029..1135714 | 1126083..1127219 | within | 0 |
Gene organization within MGE regions
Location: 1108029..1135714
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1Y72_RS05240 (P1Y72_05240) | - | 1108029..1108412 (-) | 384 | WP_033887760.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| P1Y72_RS05245 (P1Y72_05245) | - | 1108387..1108749 (-) | 363 | WP_002992136.1 | DUF1492 domain-containing protein | - |
| P1Y72_RS05250 (P1Y72_05250) | - | 1109153..1109641 (-) | 489 | WP_136243670.1 | hypothetical protein | - |
| P1Y72_RS05255 (P1Y72_05255) | - | 1109715..1110224 (-) | 510 | WP_002992482.1 | hypothetical protein | - |
| P1Y72_RS05260 (P1Y72_05260) | - | 1110226..1110399 (-) | 174 | WP_014635784.1 | hypothetical protein | - |
| P1Y72_RS05265 (P1Y72_05265) | - | 1110405..1110578 (-) | 174 | WP_000694577.1 | hypothetical protein | - |
| P1Y72_RS05270 (P1Y72_05270) | - | 1110865..1112553 (-) | 1689 | WP_002992487.1 | phage/plasmid primase, P4 family | - |
| P1Y72_RS05275 (P1Y72_05275) | - | 1112522..1113379 (-) | 858 | WP_136098354.1 | primase alpha helix C-terminal domain-containing protein | - |
| P1Y72_RS05280 (P1Y72_05280) | - | 1113380..1113652 (-) | 273 | WP_001100459.1 | hypothetical protein | - |
| P1Y72_RS05285 (P1Y72_05285) | - | 1113655..1113984 (-) | 330 | WP_003058810.1 | hypothetical protein | - |
| P1Y72_RS05290 (P1Y72_05290) | - | 1113996..1114187 (-) | 192 | WP_010922764.1 | hypothetical protein | - |
| P1Y72_RS05295 (P1Y72_05295) | - | 1114190..1114411 (-) | 222 | WP_010922763.1 | hypothetical protein | - |
| P1Y72_RS05300 (P1Y72_05300) | - | 1114408..1114740 (-) | 333 | WP_002992497.1 | hypothetical protein | - |
| P1Y72_RS05305 (P1Y72_05305) | - | 1114985..1115506 (-) | 522 | WP_002992498.1 | Rha family transcriptional regulator | - |
| P1Y72_RS05310 (P1Y72_05310) | - | 1115789..1115911 (-) | 123 | WP_002992500.1 | hypothetical protein | - |
| P1Y72_RS05315 (P1Y72_05315) | - | 1115924..1116331 (-) | 408 | WP_002992501.1 | hypothetical protein | - |
| P1Y72_RS05320 (P1Y72_05320) | - | 1116394..1116552 (-) | 159 | Protein_1035 | helix-turn-helix transcriptional regulator | - |
| P1Y72_RS05325 (P1Y72_05325) | - | 1116586..1116792 (-) | 207 | WP_002992503.1 | helix-turn-helix transcriptional regulator | - |
| P1Y72_RS05330 (P1Y72_05330) | - | 1116946..1117713 (+) | 768 | WP_003058809.1 | S24 family peptidase | - |
| P1Y72_RS05335 (P1Y72_05335) | - | 1119033..1120178 (+) | 1146 | WP_002992191.1 | site-specific integrase | - |
| P1Y72_RS05340 (P1Y72_05340) | mutL | 1120273..1122255 (+) | 1983 | WP_159330786.1 | DNA mismatch repair endonuclease MutL | - |
| P1Y72_RS05345 (P1Y72_05345) | - | 1122266..1123486 (+) | 1221 | WP_010922756.1 | MFS transporter | - |
| P1Y72_RS05350 (P1Y72_05350) | ruvA | 1123488..1124084 (+) | 597 | WP_002992186.1 | Holliday junction branch migration protein RuvA | - |
| P1Y72_RS05355 (P1Y72_05355) | - | 1124094..1124654 (+) | 561 | WP_010922755.1 | DNA-3-methyladenine glycosylase I | - |
| P1Y72_RS05360 (P1Y72_05360) | cinA | 1124723..1125994 (+) | 1272 | WP_010922754.1 | competence/damage-inducible protein A | Machinery gene |
| P1Y72_RS05365 (P1Y72_05365) | recA | 1126083..1127219 (+) | 1137 | WP_010922753.1 | recombinase RecA | Machinery gene |
| P1Y72_RS05370 (P1Y72_05370) | spx | 1127510..1127908 (+) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| P1Y72_RS05375 (P1Y72_05375) | - | 1128021..1128290 (+) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| P1Y72_RS05380 (P1Y72_05380) | ruvX | 1128287..1128706 (+) | 420 | WP_010922752.1 | Holliday junction resolvase RuvX | - |
| P1Y72_RS05385 (P1Y72_05385) | - | 1128718..1129023 (+) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| P1Y72_RS05390 (P1Y72_05390) | - | 1129436..1130995 (+) | 1560 | WP_136273970.1 | DUF2079 domain-containing protein | - |
| P1Y72_RS05395 (P1Y72_05395) | nrdD | 1131092..1133290 (+) | 2199 | WP_002992831.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| P1Y72_RS05400 (P1Y72_05400) | - | 1133472..1133618 (+) | 147 | WP_002982210.1 | hypothetical protein | - |
| P1Y72_RS05405 (P1Y72_05405) | - | 1133647..1134582 (+) | 936 | WP_010922750.1 | Gfo/Idh/MocA family oxidoreductase | - |
| P1Y72_RS05410 (P1Y72_05410) | - | 1134591..1135100 (+) | 510 | WP_011018311.1 | GNAT family N-acetyltransferase | - |
| P1Y72_RS05415 (P1Y72_05415) | nrdG | 1135100..1135714 (+) | 615 | WP_002982219.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40589.19 Da Isoelectric Point: 4.7868
>NTDB_id=800057 P1Y72_RS05365 WP_010922753.1 1126083..1127219(+) (recA) [Streptococcus pyogenes strain 1133]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDLKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDLKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=800057 P1Y72_RS05365 WP_010922753.1 1126083..1127219(+) (recA) [Streptococcus pyogenes strain 1133]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGTGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCACCCAGAATTGTTTGATGAAATCGACCTTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGATGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGTGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCACCCAGAATTGTTTGATGAAATCGACCTTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.