Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   PY824_RS10985 Genome accession   NZ_CP119172
Coordinates   2111518..2112672 (-) Length   384 a.a.
NCBI ID   WP_039671314.1    Uniprot ID   A0A380K1M8
Organism   Streptococcus macedonicus strain SGM CIP105683     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2106518..2117672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY824_RS10960 (PY824_10960) - 2108151..2109407 (+) 1257 WP_115265893.1 ISL3 family transposase -
  PY824_RS10965 (PY824_10965) - 2109494..2109811 (-) 318 WP_006531413.1 DUF1292 domain-containing protein -
  PY824_RS10970 (PY824_10970) ruvX 2109844..2110263 (-) 420 WP_006531414.1 Holliday junction resolvase RuvX -
  PY824_RS10975 (PY824_10975) - 2110260..2110529 (-) 270 WP_003066890.1 IreB family regulatory phosphoprotein -
  PY824_RS10980 (PY824_10980) spx 2110851..2111249 (-) 399 WP_009855164.1 transcriptional regulator Spx -
  PY824_RS10985 (PY824_10985) recA 2111518..2112672 (-) 1155 WP_039671314.1 recombinase RecA Machinery gene
  PY824_RS10990 (PY824_10990) cinA 2112722..2113981 (-) 1260 WP_039671315.1 competence/damage-inducible protein A Machinery gene
  PY824_RS10995 (PY824_10995) - 2114139..2114576 (-) 438 WP_014295451.1 hypothetical protein -
  PY824_RS11000 (PY824_11000) - 2114814..2115077 (-) 264 WP_223246337.1 hypothetical protein -
  PY824_RS11005 (PY824_11005) - 2115237..2115410 (-) 174 WP_039671316.1 hypothetical protein -
  PY824_RS11010 (PY824_11010) - 2115460..2115762 (-) 303 WP_014295454.1 hypothetical protein -
  PY824_RS11015 (PY824_11015) - 2115781..2115924 (-) 144 WP_014295455.1 hypothetical protein -
  PY824_RS11020 (PY824_11020) - 2116017..2116872 (+) 856 Protein_2113 helix-turn-helix transcriptional regulator -
  PY824_RS11025 (PY824_11025) ruvA 2116946..2117539 (-) 594 WP_014295457.1 Holliday junction branch migration protein RuvA -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 41263.84 Da        Isoelectric Point: 4.8577

>NTDB_id=798073 PY824_RS10985 WP_039671314.1 2111518..2112672(-) (recA) [Streptococcus macedonicus strain SGM CIP105683]
MAKKTKKTEAITKKFGDERKKALDDALKLIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRSEIDGDIGDNHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGSGDQKDSNIGKETKIKVVKNKVAPPFKTAEVEIMYGEGISRTGELVKIASDLDIIKKAGAWFSYNGEKIGQGSE
NAKKYLAEHPEVFDEIDHKVRVHYGLVEETEDEKAADIVEESAATNDNVDEVVLDLDDAIEIEE

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=798073 PY824_RS10985 WP_039671314.1 2111518..2112672(-) (recA) [Streptococcus macedonicus strain SGM CIP105683]
TTGGCTAAGAAGACAAAGAAAACAGAAGCTATCACTAAAAAATTTGGTGATGAGCGTAAAAAGGCACTTGATGATGCCTT
GAAATTAATTGAAAAAGATTTCGGTAAGGGAGCTGTTATGCGCCTTGGTGAACGTGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCTCTTGATATTGCTTTGGGTGCAGGTGGTTATCCTAAAGGGCGTATCATTGAAATCTATGGACCT
GAAAGTTCTGGTAAGACAACTGTTGCGCTTCATGCGGTAGCACAAGCTCAAAAAGAAGGTGGAATTGCTGCCTTTATCGA
TGCCGAACACGCACTTGACCCAGCTTATGCTGCGGCTCTTGGTGTTAACATTGATGAGCTTCTCTTGTCACAACCTGACT
CTGGGGAACAAGGTCTTGAAATTGCAGGAAAATTGATTGACTCAGGTGCTGTTGACCTCGTCGTTGTCGATTCTGTTGCT
GCCCTTGTACCTCGTTCCGAAATCGATGGTGACATTGGTGATAATCACGTTGGTTTGCAAGCTCGTATGATGAGTCAAGC
AATGCGTAAATTGTCAGCTTCAATCAACAAAACAAAAACAATTGCGATTTTCATCAACCAGTTGCGTGAAAAAGTTGGTG
TGATGTTTGGTAACCCAGAAACAACACCTGGTGGACGCGCGCTTAAGTTCTATGCGTCAGTTCGTCTTGATGTCCGTGGT
AACACACAAATCAAAGGTTCTGGGGACCAAAAAGATAGCAATATTGGTAAAGAAACTAAAATCAAAGTGGTTAAAAACAA
AGTTGCGCCACCATTTAAAACAGCCGAAGTTGAAATTATGTATGGTGAGGGAATTTCACGTACGGGTGAGCTTGTTAAGA
TTGCTAGCGACTTAGACATCATCAAAAAAGCAGGTGCTTGGTTCTCGTATAACGGTGAGAAAATCGGACAAGGTTCTGAA
AATGCGAAGAAATACTTGGCAGAACACCCAGAAGTCTTTGATGAAATCGACCACAAAGTACGTGTTCACTACGGTCTCGT
AGAAGAAACCGAAGATGAGAAAGCAGCAGATATTGTTGAAGAATCAGCAGCAACTAATGATAATGTTGACGAGGTTGTTC
TTGATTTAGATGATGCTATCGAAATCGAAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380K1M8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus pyogenes NZ131

88.802

100

0.888

  recA Streptococcus mutans UA159

87.047

100

0.875

  recA Streptococcus mitis NCTC 12261

85.938

100

0.859

  recA Streptococcus mitis SK321

85.938

100

0.859

  recA Streptococcus pneumoniae Rx1

85.052

100

0.859

  recA Streptococcus pneumoniae D39

85.052

100

0.859

  recA Streptococcus pneumoniae R6

85.052

100

0.859

  recA Streptococcus pneumoniae TIGR4

85.052

100

0.859

  recA Lactococcus lactis subsp. cremoris KW2

78.857

91.146

0.719

  recA Latilactobacillus sakei subsp. sakei 23K

66.301

95.052

0.63

  recA Bacillus subtilis subsp. subtilis str. 168

68.389

85.677

0.586

  recA Acinetobacter baumannii D1279779

59.207

91.927

0.544

  recA Neisseria gonorrhoeae strain FA1090

59.714

91.146

0.544

  recA Neisseria gonorrhoeae MS11

59.714

91.146

0.544

  recA Neisseria gonorrhoeae MS11

59.714

91.146

0.544

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.767

88.281

0.536

  recA Glaesserella parasuis strain SC1401

60.294

88.542

0.534

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.158

84.115

0.531

  recA Acinetobacter baylyi ADP1

59.706

88.542

0.529

  recA Vibrio cholerae strain A1552

57.062

92.188

0.526

  recA Vibrio cholerae O1 biovar El Tor strain E7946

57.062

92.188

0.526

  recA Pseudomonas stutzeri DSM 10701

56.772

90.365

0.513

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.912

86.198

0.508

  recA Helicobacter pylori 26695

57.784

86.979

0.503

  recA Helicobacter pylori strain NCTC11637

57.784

86.979

0.503

  recA Ralstonia pseudosolanacearum GMI1000

59.306

82.552

0.49