Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   O1A01_RS14980 Genome accession   NZ_CP115153
Coordinates   2866355..2867395 (-) Length   346 a.a.
NCBI ID   WP_066419640.1    Uniprot ID   A0A223KR68
Organism   Sutcliffiella sp. NC1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2861355..2872395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1A01_RS14960 (O1A01_14960) - 2861387..2862316 (-) 930 WP_270064440.1 dipeptidase -
  O1A01_RS14965 (O1A01_14965) spoVS 2862730..2862990 (-) 261 WP_003211281.1 stage V sporulation protein SpoVS -
  O1A01_RS14970 (O1A01_14970) - 2863136..2863930 (-) 795 WP_066416602.1 TIGR00282 family metallophosphoesterase -
  O1A01_RS14975 (O1A01_14975) rny 2864429..2865991 (-) 1563 WP_066419642.1 ribonuclease Y -
  O1A01_RS14980 (O1A01_14980) recA 2866355..2867395 (-) 1041 WP_066419640.1 recombinase RecA Machinery gene
  O1A01_RS14985 (O1A01_14985) cinA 2867626..2868879 (-) 1254 WP_270064441.1 competence/damage-inducible protein A Machinery gene
  O1A01_RS14990 (O1A01_14990) pgsA 2868914..2869492 (-) 579 WP_066419635.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  O1A01_RS14995 (O1A01_14995) - 2869673..2870548 (-) 876 WP_270064442.1 RodZ domain-containing protein -
  O1A01_RS15000 (O1A01_15000) - 2870569..2871360 (-) 792 WP_066419631.1 DUF3388 domain-containing protein -
  O1A01_RS15005 (O1A01_15005) - 2871673..2871930 (-) 258 WP_066419630.1 DUF3243 domain-containing protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37628.87 Da        Isoelectric Point: 5.0955

>NTDB_id=768351 O1A01_RS14980 WP_066419640.1 2866355..2867395(-) (recA) [Sutcliffiella sp. NC1]
MSDRKAALDMALKQIEKQFGKGSIMKLGEQTDRKISTSPSGSLALDIALGAGGYPKGRIIEIYGPESSGKTTVALHAIAE
VQMNGGQAAFIDAEHALDPDYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDILVVDSVAALVPKAEIEGEMGDS
HIGLQARLMSQALRKLSGSINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGGDAVGNKT
KIKVVKNKIAPPFKTAEVDIMYGEGISKEGELIDMASELDIIQKSGSWYSYNEDRIGQGRENAKQFLKENKHIMEEVSKK
LRDHFALDKDVVVPADTEEDQEEFTL

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=768351 O1A01_RS14980 WP_066419640.1 2866355..2867395(-) (recA) [Sutcliffiella sp. NC1]
GTGAGTGATCGTAAAGCTGCCTTAGATATGGCGTTAAAACAAATAGAAAAACAATTTGGTAAAGGATCTATTATGAAGTT
GGGGGAGCAAACAGATCGTAAAATTTCAACATCCCCAAGTGGATCTTTAGCTCTTGATATTGCTTTAGGTGCTGGTGGTT
ATCCTAAAGGAAGAATAATTGAAATATACGGACCAGAATCATCTGGTAAAACGACTGTTGCTCTTCATGCTATTGCGGAA
GTTCAAATGAATGGTGGACAAGCAGCGTTTATTGATGCAGAGCATGCGTTAGATCCTGATTATGCACAAAAGTTAGGTGT
AAACATTGATGAATTACTGTTATCTCAGCCTGATACTGGAGAACAAGCTCTAGAAATAGCGGAAGCGTTAGTTCGTAGTG
GTGCTGTTGATATTCTAGTAGTTGACTCCGTTGCAGCTCTAGTTCCAAAAGCGGAAATTGAAGGTGAAATGGGAGACTCC
CACATCGGTCTTCAAGCCCGCTTAATGTCCCAAGCTCTACGTAAATTATCTGGTTCTATTAATAAATCGAAAACTATTGC
TATTTTCATTAACCAAATTCGTGAAAAAGTAGGAGTTATGTTTGGAAACCCAGAAACAACTCCTGGTGGACGTGCCTTAA
AGTTTTATTCATCTGTACGTTTAGAAGTACGACGTGCTGAACAATTAAAACAAGGCGGCGACGCAGTAGGTAATAAAACG
AAGATTAAAGTAGTGAAGAATAAAATAGCTCCACCATTTAAAACGGCTGAAGTGGATATTATGTACGGAGAAGGTATTTC
AAAAGAAGGCGAGCTTATCGATATGGCATCTGAATTAGATATTATTCAGAAGAGCGGTTCTTGGTATTCTTATAACGAAG
ATCGAATCGGTCAAGGTCGTGAAAATGCGAAACAGTTTCTAAAGGAAAACAAACACATTATGGAAGAAGTATCGAAAAAA
TTGCGTGACCATTTTGCTTTAGATAAAGACGTAGTAGTACCTGCAGATACTGAAGAAGATCAAGAAGAATTTACTTTATA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223KR68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

86.787

96.243

0.835
  recA Latilactobacillus sakei subsp. sakei 23K

75.692

93.931

0.711
  recA Streptococcus pneumoniae D39

69.741

100

0.699
  recA Streptococcus pneumoniae R6

69.741

100

0.699
  recA Streptococcus pneumoniae TIGR4

69.741

100

0.699
  recA Streptococcus pneumoniae Rx1

69.741

100

0.699
  recA Streptococcus mutans UA159

69.096

99.133

0.685
  recA Streptococcus mitis NCTC 12261

71.212

95.376

0.679
  recA Streptococcus mitis SK321

70.909

95.376

0.676
  recA Streptococcus pyogenes NZ131

71.254

94.509

0.673
  recA Lactococcus lactis subsp. cremoris KW2

68.168

96.243

0.656
  recA Vibrio cholerae strain A1552

63.372

99.422

0.63
  recA Vibrio cholerae O1 biovar El Tor strain E7946

63.372

99.422

0.63
  recA Neisseria gonorrhoeae MS11

65.432

93.642

0.613
  recA Neisseria gonorrhoeae MS11

65.432

93.642

0.613
  recA Neisseria gonorrhoeae strain FA1090

65.432

93.642

0.613
  recA Glaesserella parasuis strain SC1401

60.519

100

0.607
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.83

95.087

0.607
  recA Acinetobacter baumannii D1279779

63.777

93.353

0.595
  recA Ralstonia pseudosolanacearum GMI1000

62.5

94.798

0.592
  recA Acinetobacter baylyi ADP1

62.883

94.22

0.592
  recA Helicobacter pylori 26695

59.649

98.844

0.59
  recA Helicobacter pylori strain NCTC11637

59.649

98.844

0.59
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.08

94.509

0.587
  recA Pseudomonas stutzeri DSM 10701

62.187

92.486

0.575
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.938

92.486

0.564