Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   A6764_RS11180 Genome accession   NZ_CP109943
Coordinates   2256795..2257853 (+) Length   352 a.a.
NCBI ID   WP_029099032.1    Uniprot ID   A0A553KPZ6
Organism   Brevibacillus sp. WF146     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2251795..2262853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6764_RS11165 (A6764_11165) pgsA 2253081..2253656 (+) 576 WP_029099029.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  A6764_RS11170 (A6764_11170) cinA 2253800..2255041 (+) 1242 WP_264622227.1 competence/damage-inducible protein A Machinery gene
  A6764_RS11175 (A6764_11175) - 2255048..2256634 (+) 1587 WP_029099031.1 DEAD/DEAH box helicase -
  A6764_RS11180 (A6764_11180) recA 2256795..2257853 (+) 1059 WP_029099032.1 recombinase RecA Machinery gene
  A6764_RS11185 (A6764_11185) - 2257962..2258603 (+) 642 WP_065066500.1 regulatory protein RecX -
  A6764_RS11190 (A6764_11190) rny 2258880..2260418 (+) 1539 WP_029099034.1 ribonuclease Y -
  A6764_RS11195 (A6764_11195) - 2260595..2261389 (+) 795 WP_029099035.1 TIGR00282 family metallophosphoesterase -
  A6764_RS11200 (A6764_11200) spoVS 2261507..2261767 (+) 261 WP_003385776.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 37846.20 Da        Isoelectric Point: 4.8195

>NTDB_id=751134 A6764_RS11180 WP_029099032.1 2256795..2257853(+) (recA) [Brevibacillus sp. WF146]
MSDRRAALESALRQIEKQFGKGSIMKLGDMANVQVSTVSSGALALDIALGVGGFPRGRIIEIYGPESSGKTTVALHAIAE
VQRQGGQAAFIDAEHALDPVYAAKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASIRLDVRKAEAIKVGNDVIGSKT
KIKVVKNKVAPPFKTAEVDIMYGEGISKEGSILDIGAEIDVIQKSGAWYSFNDERLGQGRENAKLFLKENPEVAAQIEAK
VREYFSLNPNSIPSMEPVNDPEQDEEPVFDFE

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=751134 A6764_RS11180 WP_029099032.1 2256795..2257853(+) (recA) [Brevibacillus sp. WF146]
TTGTCAGATCGTCGCGCTGCTTTGGAAAGTGCATTGCGTCAAATAGAAAAACAGTTCGGGAAAGGATCCATCATGAAGCT
GGGGGACATGGCCAACGTTCAGGTTTCCACCGTCTCCAGCGGAGCGCTCGCCCTCGACATCGCCCTGGGTGTGGGCGGAT
TCCCGCGCGGCCGGATCATCGAAATCTACGGACCGGAATCCTCCGGTAAAACGACGGTTGCCCTTCACGCCATCGCCGAA
GTGCAGCGCCAGGGCGGACAAGCCGCGTTTATCGACGCAGAGCACGCGTTGGACCCGGTCTACGCGGCAAAACTGGGCGT
AAACATCGATGAGCTGCTGCTCTCCCAGCCTGACACGGGCGAGCAGGCGCTGGAAATCGCCGAGGCGCTGGTGCGTTCCG
GTGCCGTTGACATCATCGTCGTGGACTCCGTAGCCGCGCTCGTGCCGAAAGCAGAGATTGAAGGCGAAATGGGCGACTCC
CACGTGGGGCTGCAGGCCCGCCTCATGTCGCAGGCGCTGCGCAAACTGTCCGGGGCCATCAACAAATCGAAGACCATCGC
CATCTTCATCAACCAGCTCCGCGAGAAAGTGGGCGTCATGTTCGGCAATCCGGAGACGACGCCGGGCGGACGCGCGCTCA
AGTTCTACGCGAGCATTCGCCTGGACGTGCGCAAGGCGGAAGCGATCAAGGTGGGCAACGACGTGATCGGCAGCAAGACC
AAGATCAAGGTCGTGAAAAACAAGGTGGCGCCGCCGTTCAAAACCGCCGAAGTGGACATCATGTACGGCGAAGGCATTTC
CAAGGAGGGCAGCATCCTCGACATCGGCGCGGAGATCGATGTGATCCAGAAGAGCGGGGCATGGTACTCCTTCAACGATG
AGCGTCTGGGCCAAGGACGGGAGAACGCCAAACTCTTCCTCAAGGAAAACCCGGAAGTGGCGGCGCAAATTGAAGCCAAA
GTGCGCGAGTATTTCAGCCTCAATCCCAACTCCATCCCGAGCATGGAGCCGGTCAACGATCCGGAGCAGGATGAGGAACC
GGTATTTGATTTCGAGTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A553KPZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

81.325

94.318

0.767
  recA Latilactobacillus sakei subsp. sakei 23K

70.468

97.159

0.685
  recA Streptococcus mitis SK321

71.212

93.75

0.668
  recA Streptococcus pneumoniae D39

70.606

93.75

0.662
  recA Streptococcus mitis NCTC 12261

70.606

93.75

0.662
  recA Streptococcus pneumoniae Rx1

70.606

93.75

0.662
  recA Streptococcus pneumoniae R6

70.606

93.75

0.662
  recA Streptococcus pneumoniae TIGR4

70.606

93.75

0.662
  recA Lactococcus lactis subsp. cremoris KW2

69.162

94.886

0.656
  recA Streptococcus mutans UA159

65.903

99.148

0.653
  recA Streptococcus pyogenes NZ131

70.336

92.898

0.653
  recA Vibrio cholerae strain A1552

65.455

93.75

0.614
  recA Vibrio cholerae O1 biovar El Tor strain E7946

65.455

93.75

0.614
  recA Neisseria gonorrhoeae MS11

62.139

98.295

0.611
  recA Neisseria gonorrhoeae MS11

62.139

98.295

0.611
  recA Neisseria gonorrhoeae strain FA1090

62.139

98.295

0.611
  recA Glaesserella parasuis strain SC1401

61.494

98.864

0.608
  recA Ralstonia pseudosolanacearum GMI1000

67.619

89.489

0.605
  recA Acinetobacter baylyi ADP1

60.057

98.864

0.594
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.303

92.898

0.588
  recA Pseudomonas stutzeri DSM 10701

60.35

97.443

0.588
  recA Acinetobacter baumannii D1279779

60.117

96.875

0.582
  recA Helicobacter pylori strain NCTC11637

59.357

97.159

0.577
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.125

90.909

0.574
  recA Helicobacter pylori 26695

59.064

97.159

0.574
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.928

91.193

0.574