Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   OHU75_RS07760 Genome accession   NZ_CP109761
Coordinates   1396238..1397275 (-) Length   345 a.a.
NCBI ID   WP_028410857.1    Uniprot ID   -
Organism   Priestia megaterium strain P-NA14     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1391238..1402275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU75_RS07735 (OHU75_07735) - 1391681..1391857 (-) 177 WP_162871443.1 hypothetical protein -
  OHU75_RS07740 (OHU75_07740) - 1392042..1392959 (-) 918 WP_098249185.1 dipeptidase -
  OHU75_RS07745 (OHU75_07745) spoVS 1393035..1393295 (-) 261 WP_003181955.1 stage V sporulation protein SpoVS -
  OHU75_RS07750 (OHU75_07750) - 1393519..1394316 (-) 798 WP_025750269.1 TIGR00282 family metallophosphoesterase -
  OHU75_RS07755 (OHU75_07755) rny 1394398..1395957 (-) 1560 WP_013058803.1 ribonuclease Y -
  OHU75_RS07760 (OHU75_07760) recA 1396238..1397275 (-) 1038 WP_028410857.1 recombinase RecA Machinery gene
  OHU75_RS07765 (OHU75_07765) cinA 1397475..1398716 (-) 1242 WP_098579291.1 competence/damage-inducible protein A Machinery gene
  OHU75_RS07770 (OHU75_07770) pgsA 1398733..1399317 (-) 585 WP_013058806.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  OHU75_RS07775 (OHU75_07775) - 1399462..1400460 (-) 999 WP_255266895.1 helix-turn-helix domain-containing protein -
  OHU75_RS07780 (OHU75_07780) - 1400473..1401264 (-) 792 WP_013058808.1 DUF3388 domain-containing protein -
  OHU75_RS07785 (OHU75_07785) - 1401478..1401738 (-) 261 WP_028410855.1 DUF3243 domain-containing protein -

Sequence

Protein


Download         Length: 345 a.a.        Molecular weight: 37425.29 Da        Isoelectric Point: 4.8279

>NTDB_id=749035 OHU75_RS07760 WP_028410857.1 1396238..1397275(-) (recA) [Priestia megaterium strain P-NA14]
MNDRQAALDMALKQIEKQFGKGSIMKLGEQTEKRISTIPSGSLALDIALGVGGYPRGRVVEVYGPESSGKTTVALHAIAE
VQQQGGQAAFIDAEHALDPVYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPKAEIEGEMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDIVGNKT
RIKVVKNKVAPPFRAAEVDIMYGEGISKEGEILDIASELDIVQKSGSWYSYNDERLGQGRENAKQFLKENTDIRQEIAGQ
VREHHGLDQDGEPAPEDDDQSDLNI

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=749035 OHU75_RS07760 WP_028410857.1 1396238..1397275(-) (recA) [Priestia megaterium strain P-NA14]
GTGAACGATCGTCAAGCAGCCCTTGATATGGCTTTAAAACAAATTGAAAAGCAATTTGGTAAAGGTTCAATTATGAAATT
AGGTGAACAAACGGAAAAAAGAATTTCTACGATTCCAAGTGGTTCATTAGCGTTAGATATAGCTTTAGGTGTAGGTGGAT
ATCCACGTGGACGTGTAGTTGAAGTATACGGTCCAGAAAGCTCAGGTAAAACAACAGTTGCTCTTCATGCGATTGCAGAA
GTTCAACAGCAGGGCGGACAGGCTGCATTTATCGATGCGGAGCACGCGTTAGATCCTGTATATGCTCAAAAATTAGGTGT
GAATATTGATGAGCTATTATTATCTCAGCCTGATACGGGAGAACAAGCTTTAGAAATCGCTGAAGCTTTAGTTCGAAGCG
GTGCAGTAGATATTATTGTTGTTGACTCAGTAGCAGCATTAGTGCCAAAAGCGGAAATTGAAGGAGAAATGGGAGACTCT
CACGTGGGTCTACAAGCTCGTTTAATGTCTCAAGCATTGCGTAAACTATCTGGAGCTATCAACAAGTCTAAAACAATCGC
TATCTTTATTAACCAAATTCGTGAAAAAGTCGGCGTTATGTTTGGCAATCCTGAAACAACTCCTGGTGGACGTGCGCTTA
AATTCTATTCTTCAGTGCGTCTAGAAGTGCGTCGTGCAGAGCAGTTAAAGCAAGGAAACGATATTGTAGGTAACAAAACA
AGAATTAAAGTTGTGAAAAACAAAGTAGCTCCGCCTTTCCGTGCTGCTGAAGTAGATATTATGTACGGAGAAGGTATTTC
AAAAGAGGGAGAAATTTTGGATATCGCTTCTGAACTAGATATTGTTCAAAAAAGTGGATCTTGGTATTCATATAATGACG
AGCGTCTAGGTCAAGGTCGTGAAAATGCAAAACAATTCTTAAAAGAAAATACTGATATTCGTCAGGAAATTGCGGGACAA
GTGCGTGAACATCATGGTTTAGATCAAGATGGAGAGCCAGCTCCTGAGGATGACGATCAAAGCGATTTAAATATTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

90.332

95.942

0.867
  recA Latilactobacillus sakei subsp. sakei 23K

74.184

97.681

0.725
  recA Streptococcus pneumoniae D39

69.388

99.42

0.69
  recA Streptococcus pneumoniae Rx1

69.388

99.42

0.69
  recA Streptococcus pneumoniae R6

69.388

99.42

0.69
  recA Streptococcus pneumoniae TIGR4

69.388

99.42

0.69
  recA Streptococcus mitis NCTC 12261

70.118

97.971

0.687
  recA Streptococcus mitis SK321

70.118

97.971

0.687
  recA Streptococcus mutans UA159

65.634

100

0.675
  recA Lactococcus lactis subsp. cremoris KW2

67.857

97.391

0.661
  recA Streptococcus pyogenes NZ131

68.693

95.362

0.655
  recA Neisseria gonorrhoeae strain FA1090

65.244

95.072

0.62
  recA Neisseria gonorrhoeae MS11

65.244

95.072

0.62
  recA Neisseria gonorrhoeae MS11

65.244

95.072

0.62
  recA Ralstonia pseudosolanacearum GMI1000

66.562

91.884

0.612
  recA Vibrio cholerae O1 biovar El Tor strain E7946

65.109

93.043

0.606
  recA Vibrio cholerae strain A1552

65.109

93.043

0.606
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

60.819

99.13

0.603
  recA Pseudomonas stutzeri DSM 10701

60.465

99.71

0.603
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.11

95.072

0.6
  recA Acinetobacter baumannii D1279779

60.526

99.13

0.6
  recA Glaesserella parasuis strain SC1401

60.058

99.42

0.597
  recA Helicobacter pylori strain NCTC11637

61.012

97.391

0.594
  recA Helicobacter pylori 26695

61.012

97.391

0.594
  recA Acinetobacter baylyi ADP1

60.117

98.841

0.594
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

61.371

93.043

0.571